nd2reader

Commit Graph

Author	SHA1	Message	Date
Gabriele Girelli	e02dd3c2c1	Fixed missing filename path.	4 years ago
Ruben Verweij	18527bf9b1	Merge pull request #40 from ggirelli/ggirelli-patch-parser-for-stitched-images Removed empty bytes at channel subchunk ends for issue #31	4 years ago
Gabriele Girelli	5fafcf1bb9	Update stitched.py	4 years ago
Ruben Verweij	cbb27ba3cc	Merge pull request #39 from ggirelli/ggirelli-patch-nd2reader-from-file Update to reader.py for issue #35	4 years ago
Gabriele Girelli	1a2bfffd9a	Fixed func def	4 years ago
Gabriele Girelli	b3421d5634	Refactored.	4 years ago
Gabriele Girelli	af6e8365fe	Added get_image test of stitched sample	4 years ago
Gabriele Girelli	55627552d4	Using numpy assets when possible, and formatted with black	4 years ago
Gabriele Girelli	699e7105eb	Switched from warning to raising exception and improved message	4 years ago
Gabriele Girelli	613d86db85	Improved assert and warning messages	4 years ago
Gabriele Girelli	09dedf203d	Fixed new init method	4 years ago
Gabriele Girelli	9a7945d708	Implemented test.	4 years ago
Gabriele Girelli	fca6cb1c3b	Allowed for fh to be either str or IO, and formatted with black.	4 years ago
Gabriele Girelli	2a3c1a317e	Changed structure to check/remove method pair	4 years ago
Gabriele Girelli	db5d8e3fb8	Allowing case of multiple unwanted bytes per step	4 years ago
Gabriele Girelli	25f7e5f661	Complexity	4 years ago
Gabriele Girelli	72cf9fca5d	Update parser.py	4 years ago
Gabriele Girelli	b2a3b887ba	Complexity	4 years ago
Gabriele Girelli	27ed229f54	Fixed complexity	4 years ago
Gabriele Girelli	2daaa53a31	Regenerated Reader	4 years ago
Gabriele Girelli	2410545165	Fixed complexity	4 years ago
Gabriele Girelli	93949b3398	Removed empty bytes at channel subchunk ends Checks if the chunk data size does not match the expected, based on image axes size. Verifies that all unwanted bytes are zero-bytes and removes them. Two triggered warnings: one for unwanted bytes and one for bytes removed (more of an INFO though).	4 years ago
Gabriele Girelli	5090f930d7	Update reader.py	4 years ago
Ruben Verweij	492d0ec68d	update Travis settings	5 years ago
Ruben Verweij	eeb4bd1063	Fix issue #34	5 years ago
Ruben Verweij	740b8b1112	Use timesteps as fallback to NDExperiment loops to determine total file duration, and thus framerate	5 years ago
Ruben Verweij	607c1e62ad	Fix error in loop handling	5 years ago
Ruben Verweij	9b2f9ca256	Merge pull request #32 from ulugbekna/handle-invalid-file-extension add a check that filename passed to ND2Reader has extension .nd2	5 years ago
Ulugbek Abdullaev	5816df198f	Merge pull request #1 from ggirelli/patch-1 f-strings not supported by Python3.6-	5 years ago
Gabriele Girelli	595978cda0	f-strings not supported by Python3.6-	5 years ago
Ruben Verweij	995d920e5f	Fix typo in z-level check	5 years ago
Ulugbek Abdullaev	538910ba01	add a check that filename passed to nd2reader has an extension .nd2 because the current implementation raises InvalidVersionError if the passed file is non-nd2 type, which is misleading add an exception InvalidFileType add a test for the new behavior of ND2Reader constructor	5 years ago
Ruben Verweij	74d384eed6	Merge pull request #33 from ggirelli/master Removed self.__class__ from super() call	5 years ago
Ruben Verweij	1728086d89	Fix codeclimate integration	5 years ago
Ruben Verweij	a16702bb72	Update README.md	5 years ago
Ruben Verweij	0e16251a24	Remove support for Python < 3.5	5 years ago
Gabriele Girelli	1c6f517366	Removed self.__class__ from super() call	5 years ago
Ruben Verweij	4eea6a81a1	Version 3.2.3 due to build error of new version number storage system	5 years ago
Ruben Verweij	fe644d241b	Merge branch 'master' of github.com:rbnvrw/nd2reader	5 years ago
Ruben Verweij	1d560969c6	New version 3.2.2	5 years ago
Ruben Verweij	de6a495171	Update release.txt	5 years ago
Ruben Verweij	312e08893e	Merge pull request #30 from rbnvrw/add-code-of-conduct-1 Create CODE_OF_CONDUCT.md	5 years ago
Ruben Verweij	5854a59d1b	Create CODE_OF_CONDUCT.md	5 years ago
Ruben Verweij	b6fdeb60a5	Merge pull request #28 from ggirelli/master Using Z slice coordinates from Z-data instead of Z-levels and show warning in case of mismatch	5 years ago
Gabriele Girelli	30cc7d74ed	Update raw_metadata.py	5 years ago
Gabriele Girelli	64679f9426	Update raw_metadata.py Changed isinstance to is. Fixed condition triggering warning.	5 years ago
Gabriele Girelli	b87b5f6697	Update raw_metadata.py	5 years ago
Gabriele Girelli	810682c667	Using Z slice coordinates from Z-data instead of Z-levels and show warning in case of mismatch	5 years ago
Ruben Verweij	3c24672ebe	Resolve issue #24	5 years ago
Ruben Verweij	2a21784d62	Issue #24 : only return a Frame when bundle_axes is only y,x	5 years ago

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