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zolfa-nd2reader
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49 Commits (f2e6153bf24d30c1c3acc08d3f75e440442ca48e)

Author SHA1 Message Date
  Ruben Verweij f2e6153bf2 Fix test and update gitignore 7 years ago
  Ruben Verweij 731a05214a Fix #4 7 years ago
  Ruben Verweij 1587ed863d Test color channels, fix a bug in color channel encoding 8 years ago
  Ruben Verweij 81b785d1e7 Test legacy Nd2, parser, reader fixes 8 years ago
  Ruben Verweij c2302092ab Extend unit tests 8 years ago
  Ruben Verweij a0ae292794 Extend unit tests, remove badge 8 years ago
  Ruben Verweij 5214180e70 Fix bytes compatibility for Python 2 8 years ago
  Ruben Verweij d943ee80b9 Unit testing: test the correct parsing of image_attributes 8 years ago
  Ruben Verweij 4acdf0cf55 Extend artificial to also write the label_map + data to file for more extensive unit testing 8 years ago
  Ruben Verweij 16288909b9 Issue #2: clean up axes handling, guess a better default axis 8 years ago
  Ruben Verweij 10c2589348 Do not add 'z' to sizes of the reader if there is only one plane, as seems to be the PIMS convention 8 years ago
  Ruben Verweij 93446019ed version 3.0.1: Include LICENSE via MANIFEST.in for conda forge 8 years ago
  Ruben Verweij d2a5d96f14 Add test for raw metadata storage 8 years ago
  Ruben Verweij 17df7ed8a6 Add more unit test for common + fix possibly endless loop 8 years ago
  Ruben Verweij e5557b0073 Fix creating test file for unit tests 8 years ago
  Ruben Verweij 9d2188aa47 Bug fixes by testing different .nd2 files 8 years ago
  Ruben Verweij a50b446373 Extend unit tests 8 years ago
  Ruben Verweij 2b0600ee09 Extend unit tests 8 years ago
  Ruben Verweij aa7e05f1d2 Very basic Reader test 8 years ago
  Ruben Verweij 0a17948b39 Last test of LabelMap 8 years ago
  Ruben Verweij 7a8733b04e Test the LabelMap 8 years ago
  Ruben Verweij 9696954baf Add test for Parser 8 years ago
  Ruben Verweij 03bfc09922 Add ArtificialND2 class to help in testing nd2 file reading and parsing 8 years ago
  Ruben Verweij 5974408aa5 Remove functional test for now, cannot store large nd2 files on github 8 years ago
  Ruben Verweij dc987dbcaa Remove test data (until I find a solution to store them on github) 8 years ago
  Ruben Verweij 59101e66e4 data 8 years ago
  Ruben Verweij c212ced139 Test files to git large file storage (git LFS) 8 years ago
  Ruben Verweij 3620064dfd Update tests 8 years ago
  Ruben Verweij c6e5a13a0d Provide backwards compatibility with old 2.1.3 version 8 years ago
  Ruben Verweij 0d3e07e521 Fix path to test files 8 years ago
  Ruben Verweij 8f513fde74 Add unit tests for opening files and axis sizes 8 years ago
  Ruben Verweij 1827fffbd8 Add test for raw metadata 8 years ago
  Ruben Verweij 7761dabac2 Test date parsing 8 years ago
  Ruben Verweij cb2c06f9a5 Complete refactor 8 years ago
  Ruben Verweij d19a9c305b Refactor, add metadata to Frame objects, support PIMS open function 8 years ago
  Jim Rybarski 18e1add3c8 revert versions to the way they were since it broke publishing, added unit test to ensure they're in sync 9 years ago
  Jim Rybarski cd4feea3a6 version number is now set in exactly one place 9 years ago
  Jim Rybarski 47966b75dd resolves #129: renamed filter() to select() 9 years ago
  jim 7c0c8be065 resolves #119: removed some commented-out code and an unused import 9 years ago
  Jim Rybarski 6b859bd7ba updated docs, minor bug fixes, added unit tests 9 years ago
  Jim Rybarski dcdfe161d0 resolves #84: tests run 9 years ago
  jim 949d0612d4 #66 began enormous refactor to support multiple versions of ND2s in an elegant way 9 years ago
  jim c16dccd13a #42 tests for calculate_z_level 10 years ago
  jim 8ae2bf6d06 #42 added simple calculate_channel test 10 years ago
  jim 047af59a1a #42 many passing tests for calculate_channel 10 years ago
  jim 2b62ed4d2d #42 many passing tests for calculate_field_of_view 10 years ago
  jim 07e2297aaf #42 fixed dockerfile and makefile, got one passing test 10 years ago
  jim ae09b688b2 #42 refactored and tidied up a bit, created test files 10 years ago
  jim e995f4b6f4 resolves #16 removed scikit image reference, deleted obsolete files 10 years ago
  Jim Rybarski 872255c61c sorta built new parser 10 years ago