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#42 tests for calculate_z_level

feature/load_slices
jim 10 years ago
parent
commit
c16dccd13a
1 changed files with 71 additions and 1 deletions
  1. +71
    -1
      tests/__init__.py

+ 71
- 1
tests/__init__.py View File

@ -107,7 +107,77 @@ class TestNd2Parser(unittest.TestCase):
def test_calculate_channel_ludicrous_values(self):
nd2 = MockNd2Parser(['', 'GFP', 'dsRed', 'dTomato', 'lulzBlue', 'jimbotronPurple', 'orange'], list(range(31)), list(range(17)))
for i in range(1000):
for i in range(10000):
for n, channel in enumerate(['', 'GFP', 'dsRed', 'dTomato', 'lulzBlue', 'jimbotronPurple', 'orange'], start=i*7):
self.assertEqual(Nd2Parser._calculate_channel(nd2, n), channel)
def test_calculate_z_level(self):
nd2 = MockNd2Parser([''], [0], [0])
for frame_number in range(1000):
result = Nd2Parser._calculate_z_level(nd2, frame_number)
self.assertEqual(result, 0)
def test_calculate_z_level_1c1f2z(self):
nd2 = MockNd2Parser([''], [0], [0, 1])
for frame_number in range(1000):
result = Nd2Parser._calculate_z_level(nd2, frame_number)
self.assertEqual(result, frame_number % 2)
def test_calculate_z_level_31c17f1z(self):
nd2 = MockNd2Parser(list(range(31)), list(range(17)), [0])
for frame_number in range(1000):
result = Nd2Parser._calculate_z_level(nd2, frame_number)
self.assertEqual(result, 0)
def test_calculate_z_level_2c1f2z(self):
nd2 = MockNd2Parser(['', 'GFP'], [0], [0, 1])
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 0), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 1), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 2), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 3), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 4), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 5), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 6), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 7), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 8), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 9), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 10), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 11), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 12), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 13), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 14), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 15), 1)
def test_calculate_z_level_2c3f5z(self):
nd2 = MockNd2Parser(['', 'GFP'], [0, 1, 2], [0, 1, 2, 3, 4])
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 0), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 1), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 2), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 3), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 4), 2)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 5), 2)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 6), 3)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 7), 3)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 8), 4)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 9), 4)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 10), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 11), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 12), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 13), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 14), 2)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 15), 2)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 16), 3)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 17), 3)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 18), 4)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 19), 4)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 20), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 21), 0)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 22), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 23), 1)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 24), 2)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 25), 2)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 26), 3)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 27), 3)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 28), 4)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 29), 4)
self.assertEqual(Nd2Parser._calculate_z_level(nd2, 30), 0)

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