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zolfa-nd2reader
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420 Commits (b134842880c63b300da5f07a0f746391e8533221)
 

Author SHA1 Message Date
  Ruben Verweij b134842880 Update contributing 7 years ago
  Ruben Verweij a42412db31 Add universal bdist wheel 7 years ago
  Ruben Verweij fbdb5a8a55 Version 3.0.6: Add FOV support 7 years ago
  Ruben Verweij 31868d2765 Add additional date formats for parsing raw metadata 7 years ago
  Ruben Verweij 847f1f3517 Version 3.0.5 7 years ago
  Ruben Verweij 482d719c3e Refactor CQ 7 years ago
  Ruben Verweij a6760b173e Test color channels, fix a bug in color channel encoding 7 years ago
  Ruben Verweij 6511f7d82a Test legacy Nd2, parser, reader fixes 7 years ago
  Ruben Verweij 0187996815 Extend unit tests 7 years ago
  Ruben Verweij 6bd8ac2bd2 Extend unit tests, remove badge 7 years ago
  Ruben Verweij 25275d2fd6 Remove unused lines from artificial 7 years ago
  Ruben Verweij e840e11c36 Fix bytes compatibility for Python 2 7 years ago
  Ruben Verweij 34191adb61 Unit testing: test the correct parsing of image_attributes 7 years ago
  Ruben Verweij 589345ebac Add a class priority so this reader will be loaded before the Bioformats reader 7 years ago
  Ruben Verweij 1a3a78f34c Add try/except blocks to make code more robust + fix unit tests 7 years ago
  Ruben Verweij 0accf20f68 Merge remote-tracking branch 'origin/master' 7 years ago
  Ruben Verweij 9f3e4c1b35 Extend artificial to also write the label_map + data to file for more extensive unit testing 7 years ago
  Ruben Verweij 60972d90a9 New documentation theme 7 years ago
  Ruben Verweij 6128ba4838 Fix imports of pims and release 3.0.4 7 years ago
  Ruben Verweij 09bd870734 Fix small bug when uiCount cannot be found 7 years ago
  Ruben Verweij e7555f87de Version 3.0.3 7 years ago
  Ruben Verweij f5301c039d Add a third method to determine the loop sampling interval 7 years ago
  Ruben Verweij 0442981422 Travis: use less python versions for testing 7 years ago
  Ruben Verweij 531f53a36a Update travis script because of upstream bug 7 years ago
  Ruben Verweij cbdec0fdc9 Cache timesteps and add frame rate property 7 years ago
  Ruben Verweij 9f96d23988 Always set 't' axis 7 years ago
  Ruben Verweij 5f43890053 Also get sampling interval when dAvgPeriodDiff is not set 7 years ago
  Ruben Verweij 4bd89eac89 New documentation 7 years ago
  Ruben Verweij 9c957a1d0a Only setup certain axes if size > 1 7 years ago
  Ruben Verweij 30457e5931 Update version 3.0.2 7 years ago
  Ruben Verweij df7913e6b3 Issue #2: fix calculation of image group number when there is no z-axis 7 years ago
  Ruben Verweij bbc95851e6 Merge remote-tracking branch 'origin/master' 7 years ago
  Ruben Verweij d4e505779d Issue #2: clean up axes handling, guess a better default axis 7 years ago
  Ruben Verweij bb7d3a3df4 Update README.md 7 years ago
  Ruben Verweij b4170d6b85 Merge remote-tracking branch 'origin/master' 7 years ago
  Ruben Verweij 80a6e51a77 Fix issue #2 by following PIMS conventions more closely 7 years ago
  Ruben Verweij a9683c528d Installation via Conda Forge 7 years ago
  Ruben Verweij 01acb84546 Add conda installation instructions 7 years ago
  Ruben Verweij 45674ff241 Do not add 'z' to sizes of the reader if there is only one plane, as seems to be the PIMS convention 7 years ago
  Ruben Verweij 0bd5bdc0fd version 3.0.1: Include LICENSE via MANIFEST.in for conda forge 7 years ago
  Ruben Verweij 107c05293d Fix the number of frames 7 years ago
  Ruben Verweij 5b2d2a3832 update docs for new version 7 years ago
  Ruben Verweij 07efade878 Update readme for release on PyPi 7 years ago
  Ruben Verweij 416f4f69fc Update documentation, quick start tutorial 7 years ago
  Ruben Verweij 325ad5f8a6 Add test for raw metadata storage 7 years ago
  Ruben Verweij da38f7cd66 Add more unit test for common + fix possibly endless loop 7 years ago
  Ruben Verweij 3590a7ec6b Fix creating test file for unit tests 7 years ago
  Ruben Verweij b640490de1 Bug fixes by testing different .nd2 files 7 years ago
  Ruben Verweij 480e231d17 Bump version number to reflect api changes 7 years ago
  Ruben Verweij 46eff09834 Update README.md 7 years ago