Jim Rybarski
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a1a8f34c29
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Merge pull request #82 from jimrybarski/81-get-time-index
resolves #81: images now include the frame number (formerly called th…
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9 years ago |
jim
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55a3222e4f
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resolves #81: images now include the frame number (formerly called the time index). This tells you what order a particular image appeared in its field of view, which is useful when you're considering fields of view as independent regions of interest. Also fixed a bug where the number of image cycles (which should be renamed to "frames") was incorrect for some nd2s.
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9 years ago |
Jim Rybarski
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9b0b162d2e
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Merge pull request #79 from jimrybarski/68-getitem-bug
resolves #68: indexing was not returning the correct image and skippe…
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9 years ago |
jim
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86d2924d35
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resolves #68: indexing was not returning the correct image and skipped frame entirely when there were multiple channels
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9 years ago |
Jim Rybarski
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3b18c620ce
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Merge pull request #78 from jimrybarski/77-handle-missing-attributes
resolves #77: fixes bug where an nd2 with a single cycle or z-level w…
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9 years ago |
jim
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74dc101776
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resolves #77: fixes bug where an nd2 with a single cycle or z-level wouldn't work
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9 years ago |
Jim Rybarski
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356897bdda
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Merge pull request #76 from jimrybarski/73-new-dockerfile
73 new dockerfile
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9 years ago |
Jim Rybarski
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b63e745698
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removed redundancy
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9 years ago |
Jim Rybarski
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3ff1f4baa2
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Merge branches '73-new-dockerfile' and 'dev' of https://github.com/jimrybarski/nd2reader into 73-new-dockerfile
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9 years ago |
jim
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e75729ea2f
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fixed dockerfile error
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9 years ago |
jim
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46d8ccd019
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added build files to dockerignore
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9 years ago |
Jim Rybarski
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ac94f3789f
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resolves #73: it's now much easier to do functional testing via docker
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9 years ago |
Jim Rybarski
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a0b57ecb53
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Merge pull request #75 from jimrybarski/69-dockerignore
69 dockerignore
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9 years ago |
Jim Rybarski
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d5dc3e3472
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Merge branch 'dev' into 69-dockerignore
Conflicts:
Makefile
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9 years ago |
Jim Rybarski
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1083ff663b
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resolves #69: Added docker ignore file
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9 years ago |
Jim Rybarski
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fa477b7da3
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Merge remote-tracking branch 'origin/master'
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9 years ago |
Jim Rybarski
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fc91ae1633
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made functional testing easier
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9 years ago |
Jim Rybarski
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46cc073104
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Merge pull request #72 from jimrybarski/71-better-makefile
71 better makefile
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9 years ago |
jim
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b267d76924
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resolves #71: minor improvements to Makefile
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9 years ago |
Jim Rybarski
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da6f753fcf
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Merge pull request #65 from jimrybarski/dev
Dev
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10 years ago |
Jim Rybarski
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ab5de06e05
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Merge pull request #64 from jimrybarski/62-document-version
62 document version
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10 years ago |
jim
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8207e78f00
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resolves #62: fixed typo
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10 years ago |
jim
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ae96bd8956
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resolves #62: added version of NIS Elements
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10 years ago |
jim
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de22d09393
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resolves #62: added version of NIS Elements
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10 years ago |
Jim Rybarski
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495139faca
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Update README.md
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10 years ago |
Jim Rybarski
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5dd7a827fa
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Update README.md
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10 years ago |
Jim Rybarski
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d615eea5cc
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Merge pull request #58 from jimrybarski/dev
Dev
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10 years ago |
Jim Rybarski
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04d909f9ed
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Merge pull request #57 from jimrybarski/56-readme-for-v1-1
56 readme for v1 1
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10 years ago |
Jim Rybarski
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092a993dc6
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#56 fix six version
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10 years ago |
Jim Rybarski
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1fc449a6e0
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#56 clearer README, auto-install dependencies, build numpy from source in Docker
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10 years ago |
Jim Rybarski
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49737f678f
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resolves #56
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10 years ago |
Jim Rybarski
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524ec8de84
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Merge pull request #55 from jimrybarski/54-feature-handle-index-error
resolves #54: raises Index error when you go out of bounds
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10 years ago |
jim
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18bb3f5392
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resolves #54: raises Index error when you go out of bounds
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10 years ago |
Jim Rybarski
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9eb8a4b762
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Merge pull request #53 from jimrybarski/42-feature-unittests
42 feature unittests
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10 years ago |
jim
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c16dccd13a
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#42 tests for calculate_z_level
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10 years ago |
jim
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8ae2bf6d06
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#42 added simple calculate_channel test
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10 years ago |
jim
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047af59a1a
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#42 many passing tests for calculate_channel
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10 years ago |
jim
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2b62ed4d2d
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#42 many passing tests for calculate_field_of_view
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10 years ago |
jim
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07e2297aaf
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#42 fixed dockerfile and makefile, got one passing test
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10 years ago |
jim
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ae09b688b2
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#42 refactored and tidied up a bit, created test files
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10 years ago |
Jim Rybarski
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5104a232ff
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combined python2.7 and 3.4 into one Dockerfile since it's just for testing anyway
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10 years ago |
Jim Rybarski
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3f126dadb9
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two dockerfiles as prelude to testing
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10 years ago |
Jim Rybarski
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c78d367c54
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Merge pull request #51 from jimrybarski/40-feature-slices
resolves #40: adds slicing semantics
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10 years ago |
Jim Rybarski
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a40b243abb
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resolves #40: adds slicing semantics
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10 years ago |
Jim Rybarski
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3e0d788e7c
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Merge pull request #50 from jimrybarski/39-feature-getitem
39 feature getitem
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10 years ago |
Jim Rybarski
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454f5529fe
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#39 fixed image sets
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10 years ago |
Jim Rybarski
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89ddce3a7b
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resolves #39
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10 years ago |
Jim Rybarski
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0f9c6128e3
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#39: field of view works
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10 years ago |
Jim Rybarski
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e8cb08f4cc
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#39: calculating channel and z_level works right
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10 years ago |
Jim Rybarski
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c9d3a82930
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#39: getting individual images works, however, z_level and field of view are wrong
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10 years ago |