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zolfa-nd2reader
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336 Commits (1d894b8f0ab09901a5234468a9ff286d5f23acb9)
 

Author SHA1 Message Date
  Ruben Verweij 1d894b8f0a Update README.md 8 years ago
  Ruben Verweij 0760dedfd1 Set theme jekyll-theme-cayman 8 years ago
  Ruben Verweij 4d0fb8165d Create index.md 8 years ago
  Ruben Verweij 00cc869497 Correctly parse experiment data for NDAqcuisition and add get_timesteps function to reader 8 years ago
  Ruben Verweij c2e48e36db Add ability to bundle the color axis 8 years ago
  Ruben Verweij 3b07b58d01 Add ability to bundle the color axis 8 years ago
  Ruben Verweij cf8f241dfa Speedup numpy installation on travis 8 years ago
  Ruben Verweij 4877ee0591 Fix old leftover in setup 8 years ago
  Ruben Verweij 334817cead Fix bug 8 years ago
  Ruben Verweij 0a944682e0 Fix path to test files 8 years ago
  Ruben Verweij bd10811aee Add unit tests for opening files and axis sizes 8 years ago
  Ruben Verweij 481b2de4c6 Fix gitignore file 8 years ago
  Ruben Verweij fa0e0c9a86 Parse part of ND experiment metadata 8 years ago
  Ruben Verweij a56a7cc665 Fix dtype at np.float64 8 years ago
  Ruben Verweij a716471131 Small fixes 8 years ago
  Ruben Verweij 1827fffbd8 Add test for raw metadata 8 years ago
  Ruben Verweij 7761dabac2 Test date parsing 8 years ago
  Ruben Verweij ce1e2b55ae Report coverage 8 years ago
  Ruben Verweij 63a286d167 Hopefully fix Python 2 import error 8 years ago
  Ruben Verweij 685afb16ab Rename exceptions 8 years ago
  Ruben Verweij 2bec3db873 Correctly install coverage module 8 years ago
  Ruben Verweij 630afa4926 Add code coverage info 8 years ago
  Ruben Verweij 7c779b3a40 Small refactor of common functions 8 years ago
  Ruben Verweij cb2c06f9a5 Complete refactor 8 years ago
  Ruben Verweij 6f151e8701 Reduce code complexity 8 years ago
  Ruben Verweij 77d886945d Add codeclimate integration 8 years ago
  Ruben Verweij 3ed8e243eb Travis: only support numpy supported Python versions 8 years ago
  Ruben Verweij 5f1477a8c9 Add CI via Travis 8 years ago
  Ruben Verweij d19a9c305b Refactor, add metadata to Frame objects, support PIMS open function 8 years ago
  Ruben Verweij 7b7bf1ac25 Start porting to PIMS framework, cleanup unnecessary files 8 years ago
  Ruben Verweij 4ffc0bdf85 Correctly scale ROI sizes and position 8 years ago
  Ruben Verweij d0bb78f67a Add ROI type and shape 8 years ago
  Ruben Verweij 6f800c49f6 Added parsing for basic ROI metadata. 8 years ago
  Ruben Verweij 20c669c4ae Rebranding in anticipation of better metadata support (mainly for FRAP experiments). 8 years ago
  Jim Rybarski 883d0c1b85 switch 9 years ago
  Jim Rybarski 8982825640 less harsh language 9 years ago
  Jim Rybarski 50c5b02fe6 Merge remote-tracking branch 'origin/master' 9 years ago
  Jim Rybarski 4cc1ef2dd8 I'm switching to Micro-Manager and never looking back. Goodbye nd2reader, it was great while it lasted. 9 years ago
  jim 340d74fb8e deleted CameraSettings since it's no longer used 9 years ago
  Jim Rybarski b80ed8c75b possible fix for weird problem resulting from having many exposure times 9 years ago
  Jim Rybarski fd88da413a Merge pull request #153 from jimrybarski/152-fix-array-wrap 9 years ago
  jim 4a48847630 resolves #152: images truly act like numpy arrays now and are also displayable 9 years ago
  Jim Rybarski a916c4822d Merge pull request #151 from jimrybarski/150-remove-camera-settings 9 years ago
  jim 4194f073dd resolves #150, #149: removed camera settings entirely because they are buggy and terrible 9 years ago
  jim e41d8eb99d fixed case 9 years ago
  jim 19c45ed952 Version 2.1.1 9 years ago
  jim b9ee52270e added some functional tests 9 years ago
  Jim Rybarski 3b5b934ba2 Merge pull request #148 from jimrybarski/147-more-numpylike-behavior 9 years ago
  jim a1d73157b4 #147: this mostly resolves the issue and I'm going to close it out with this patch, however, I'm not satisfied with the solution (taken from http://stackoverflow.com/questions/16805987/python-numpy-ndarray-subclasses-and-zero-rank-arrays). While this allows most numpy operations to work, you still can't do basic things like adding two Image objects (even though np.sum([[n[0], n[1]]]) will work). Hopefully no one will care or notice 9 years ago
  Jim Rybarski 8aaa453bbd attempt to fix red highlighting 9 years ago