Ruben Verweij
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abeb67b39e
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Test legacy Nd2, parser, reader fixes
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8 years ago |
Ruben Verweij
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73ba16bedc
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Extend unit tests
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8 years ago |
Ruben Verweij
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f039b9e123
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Extend unit tests, remove badge
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8 years ago |
Ruben Verweij
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55b43d948e
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Remove unused lines from artificial
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8 years ago |
Ruben Verweij
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b143f85e3e
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Fix bytes compatibility for Python 2
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8 years ago |
Ruben Verweij
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1ddf100875
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Unit testing: test the correct parsing of image_attributes
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8 years ago |
Ruben Verweij
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d074c39638
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Add a class priority so this reader will be loaded before the Bioformats reader
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8 years ago |
Ruben Verweij
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53737b69f0
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Add try/except blocks to make code more robust + fix unit tests
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8 years ago |
Ruben Verweij
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9fa2f42c2d
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Merge remote-tracking branch 'origin/master'
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8 years ago |
Ruben Verweij
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c4a783f318
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Extend artificial to also write the label_map + data to file for more extensive unit testing
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8 years ago |
Ruben Verweij
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4ff20b16b3
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New documentation theme
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8 years ago |
Ruben Verweij
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4d21e4bdb1
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Fix imports of pims and release 3.0.4
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8 years ago |
Ruben Verweij
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dc6c41ea9d
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Fix small bug when uiCount cannot be found
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8 years ago |
Ruben Verweij
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42ddb0e7d5
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Version 3.0.3
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8 years ago |
Ruben Verweij
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738d0f6e56
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Add a third method to determine the loop sampling interval
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8 years ago |
Ruben Verweij
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cbe5df4c64
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Travis: use less python versions for testing
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8 years ago |
Ruben Verweij
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c1f216d0e6
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Update travis script because of upstream bug
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8 years ago |
Ruben Verweij
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40aa6c8e49
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Cache timesteps and add frame rate property
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8 years ago |
Ruben Verweij
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a305f4b66a
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Always set 't' axis
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8 years ago |
Ruben Verweij
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d5752f1633
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Also get sampling interval when dAvgPeriodDiff is not set
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8 years ago |
Ruben Verweij
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66fea7e8dd
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New documentation
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8 years ago |
Ruben Verweij
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689b79c13f
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Only setup certain axes if size > 1
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8 years ago |
Ruben Verweij
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f81190e152
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Update version 3.0.2
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8 years ago |
Ruben Verweij
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27955c761a
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Issue #2: fix calculation of image group number when there is no z-axis
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8 years ago |
Ruben Verweij
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a0bd4aeb23
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Merge remote-tracking branch 'origin/master'
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8 years ago |
Ruben Verweij
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aa842847bb
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Issue #2: clean up axes handling, guess a better default axis
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8 years ago |
Ruben Verweij
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28a68bbb13
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Update README.md
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8 years ago |
Ruben Verweij
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96549f365d
|
Merge remote-tracking branch 'origin/master'
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8 years ago |
Ruben Verweij
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26138af687
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Fix issue #2 by following PIMS conventions more closely
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8 years ago |
Ruben Verweij
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4871f4e268
|
Installation via Conda Forge
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8 years ago |
Ruben Verweij
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7674c9d782
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Add conda installation instructions
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8 years ago |
Ruben Verweij
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0de328661f
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Do not add 'z' to sizes of the reader if there is only one plane, as seems to be the PIMS convention
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8 years ago |
Ruben Verweij
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e76a377b83
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version 3.0.1: Include LICENSE via MANIFEST.in for conda forge
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8 years ago |
Ruben Verweij
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2298c82da4
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Fix the number of frames
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8 years ago |
Ruben Verweij
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41fa61da2c
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update docs for new version
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8 years ago |
Ruben Verweij
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a8cfdeea68
|
Update readme for release on PyPi
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8 years ago |
Ruben Verweij
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396f750c61
|
Update documentation, quick start tutorial
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8 years ago |
Ruben Verweij
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22a3c1d51e
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Add test for raw metadata storage
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8 years ago |
Ruben Verweij
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3785cf464e
|
Add more unit test for common + fix possibly endless loop
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8 years ago |
Ruben Verweij
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935ae29992
|
Fix creating test file for unit tests
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8 years ago |
Ruben Verweij
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d69ae56a5b
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Bug fixes by testing different .nd2 files
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8 years ago |
Ruben Verweij
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7bbdb0ec7c
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Bump version number to reflect api changes
|
8 years ago |
Ruben Verweij
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e5e0e8825b
|
Update README.md
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8 years ago |
Ruben Verweij
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6f4536f1e2
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Add badge
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8 years ago |
Ruben Verweij
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a21afd8e0f
|
Add badge
|
8 years ago |
Ruben Verweij
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0335cff040
|
Add badge
|
8 years ago |
Ruben Verweij
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c289a45c02
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Extend unit tests
|
8 years ago |
Ruben Verweij
|
90d02359de
|
Extend unit tests
|
8 years ago |
Ruben Verweij
|
235afcc11b
|
Extend unit tests
|
8 years ago |
Ruben Verweij
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676fb77daa
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Fix link
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8 years ago |