You can not select more than 25 topics Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.
 
 
 
jim 4c894fb21f refactored a bit 10 years ago
nd2reader refactored a bit 10 years ago
tests sorta built new parser 10 years ago
.gitignore refactored a bit 10 years ago
LICENSE figured out timepoint counts, updated license 10 years ago
README.md somewhat more informative readme 10 years ago
tests.py sorta built new parser 10 years ago

README.md

nd2reader

Simple access to hierarchical .nd2 files

About

.nd2 files contain hierarchical image data, which can be split along multiple axes: time, fields of view, focus, and filter channel. Maybe others as well? This packages allows you to view how the data is organized, and to extract the image data from a particular set of the hierarchy.

Images are numpy arrays.

Dependencies

numpy

Installation

I'll write this eventually.