jim
|
bc8afedcf9
|
resolves #23 - fixed bug due to improperly refactored logic condition
|
10 years ago |
jim
|
3c0e4a45f1
|
resolves #19 - more efficient checking of spacer images
|
10 years ago |
jim
|
e995f4b6f4
|
resolves #16 removed scikit image reference, deleted obsolete files
|
10 years ago |
Jim Rybarski
|
9aadde5739
|
deleted unused method
|
10 years ago |
Jim Rybarski
|
d06153fa0d
|
much refactor. very change
|
10 years ago |
jim
|
46b1cdb933
|
#11 eliminated the messy parts of the parser, mostly
|
10 years ago |
jim
|
5930c63e51
|
#11 made parser section more readable
|
10 years ago |
Jim Rybarski
|
de8915fd6b
|
simplified even more
|
10 years ago |
Jim Rybarski
|
26ff38d039
|
created dockerfile
|
10 years ago |
Jim Rybarski
|
c2cf7958e3
|
added requirements file
|
10 years ago |
jim
|
7fcf2a5740
|
#11 - partial refactor
|
10 years ago |
jim
|
b5a84b8059
|
resolves #5: removed two unnecessary array typecasting operations
|
10 years ago |
jim
|
c7cc838663
|
fixed absolute start and redid logging
|
10 years ago |
jim
|
719fe46f86
|
extract absolute start time of acquisition
|
10 years ago |
jim
|
33a604b4e3
|
added field of view to image properties
|
10 years ago |
jim
|
f4c379f685
|
added channel name convenience method
|
10 years ago |
Jim Rybarski
|
b7bc954248
|
Fixed bug where ND2s having only one channel couldn't be opened
|
10 years ago |
jim
|
5ef69bca41
|
resolves #1 hopefully
|
10 years ago |
Jim Rybarski
|
01783026f8
|
force three zoom levels
|
10 years ago |
jim
|
4a0a2c57c1
|
removed logs
|
10 years ago |
jim
|
e7e2682949
|
added some properties to Image
|
10 years ago |
jim
|
d44968ade6
|
fixed error where non-deleted fields of view woudn't work
|
10 years ago |
jim
|
4c894fb21f
|
refactored a bit
|
10 years ago |
Jim Rybarski
|
0f836acb26
|
cleaned up a bit
|
10 years ago |
jim
|
0bd231086b
|
fixed indicies - I think they might vary depending on file so this could cause problems
|
10 years ago |
jim
|
19b5ae5221
|
made some attributes public
|
10 years ago |
Jim Rybarski
|
872255c61c
|
sorta built new parser
|
10 years ago |
jim
|
b4878e28dc
|
made a test model just to figure out how to refactor things
|
10 years ago |
jim
|
b0fb161355
|
added public access to field of view count
|
10 years ago |
jim
|
57940efae0
|
got image set iteration working
|
10 years ago |
jim
|
4e23aa8f69
|
image validity test, iterator for all images
|
10 years ago |
jim
|
31e53aae9f
|
figured out timepoint counts, updated license
|
10 years ago |
jim
|
9aed3cb623
|
refactored a bit
|
10 years ago |
jim
|
3b53a74f65
|
don't show cropped channels
|
10 years ago |
jim
|
bf35675022
|
solved missing fields of view issue
|
10 years ago |
jim
|
14d916bc96
|
really got images now, code so shitty tho
|
10 years ago |
jim
|
2e9b558b15
|
got images sorta working again
|
10 years ago |
Jim Rybarski
|
d0401fd8e4
|
identified some metadata to extract
|
10 years ago |
Jim Rybarski
|
5fd09ca2bd
|
reads chunks
|
10 years ago |
Jim Rybarski
|
b619d35ce4
|
gets chunk labels and pointers
|
10 years ago |
Jim Rybarski
|
8b01f7ff65
|
reads the chunk map location
|
10 years ago |