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zolfa-nd2reader
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65 Commits (34191adb61ff0c4092854f531cad342d14c6145e)

Author SHA1 Message Date
  Ruben Verweij 6128ba4838 Fix imports of pims and release 3.0.4 7 years ago
  Ruben Verweij e7555f87de Version 3.0.3 7 years ago
  Ruben Verweij 30457e5931 Update version 3.0.2 7 years ago
  Ruben Verweij 0bd5bdc0fd version 3.0.1: Include LICENSE via MANIFEST.in for conda forge 7 years ago
  Ruben Verweij 480e231d17 Bump version number to reflect api changes 7 years ago
  Ruben Verweij 6d1fd6d243 Provide backwards compatibility with old 2.1.3 version 7 years ago
  Ruben Verweij 63a286d167 Hopefully fix Python 2 import error 7 years ago
  Ruben Verweij 7b7bf1ac25 Start porting to PIMS framework, cleanup unnecessary files 7 years ago
  jim 4a48847630 resolves #152: images truly act like numpy arrays now and are also displayable 8 years ago
  jim 4194f073dd resolves #150, #149: removed camera settings entirely because they are buggy and terrible 8 years ago
  jim 19c45ed952 Version 2.1.1 8 years ago
  Jim Rybarski 13139518b3 Bump version to 2.1.0, updated documentation, removed skips from some unit tests 9 years ago
  jim a7ddaadf39 bumped version to 2.0.2 9 years ago
  jim 4aa5a97e80 bumped version to 2.0.1 9 years ago
  Jim Rybarski 25c4ce7f78 resolves #135. we're ready to publish version 2.0.0 9 years ago
  jim 949d0612d4 #66 began enormous refactor to support multiple versions of ND2s in an elegant way 9 years ago
  jim 55a3222e4f resolves #81: images now include the frame number (formerly called the time index). This tells you what order a particular image appeared in its field of view, which is useful when you're considering fields of view as independent regions of interest. Also fixed a bug where the number of image cycles (which should be renamed to "frames") was incorrect for some nd2s. 9 years ago
  jim 86d2924d35 resolves #68: indexing was not returning the correct image and skipped frame entirely when there were multiple channels 9 years ago
  Jim Rybarski 49737f678f resolves #56 9 years ago
  jim 18bb3f5392 resolves #54: raises Index error when you go out of bounds 9 years ago
  jim 07e2297aaf #42 fixed dockerfile and makefile, got one passing test 9 years ago
  jim ae09b688b2 #42 refactored and tidied up a bit, created test files 9 years ago
  Jim Rybarski a40b243abb resolves #40: adds slicing semantics 9 years ago
  Jim Rybarski 454f5529fe #39 fixed image sets 9 years ago
  Jim Rybarski 89ddce3a7b resolves #39 9 years ago
  Jim Rybarski 0f9c6128e3 #39: field of view works 9 years ago
  Jim Rybarski e8cb08f4cc #39: calculating channel and z_level works right 9 years ago
  Jim Rybarski c9d3a82930 #39: getting individual images works, however, z_level and field of view are wrong 9 years ago
  Jim Rybarski 4c1a4a0330 resolves #45: implements the __len__ method 9 years ago
  Jim Rybarski 06d6a21586 resolves #37: Python 3 support! 9 years ago
  Jim Rybarski 8733b366d8 #39 9 years ago
  Jim Rybarski 095814450c #39 halfway implemented getitem. can you get non-cyclical field of view orders? if so that would invalidate this approach 9 years ago
  Jim Rybarski fe32c62864 #2 finished cleaning up parser 9 years ago
  Jim Rybarski d5c8eb5cd1 #2 finished comments and cleanup of public interface 9 years ago
  jim ffb3f43f7f #2 added reprs 9 years ago
  jim 2861d551cb #2 moved count methods to parser and fixed subtle bug in method that filtered out gap images 9 years ago
  Jim Rybarski 98391dc3c0 refactored the way images are validated 9 years ago
  Jim Rybarski 0dcb18ce00 changed log level 9 years ago
  Jim Rybarski a8a0d2a083 added repr 9 years ago
  Jim Rybarski 50a6de765b removed test lines 9 years ago
  Jim Rybarski 3d387a23c1 resolves #4 9 years ago
  jim 7b88c9104e fixed typos 9 years ago
  Jim Rybarski 9aadde5739 deleted unused method 9 years ago
  Jim Rybarski d06153fa0d much refactor. very change 9 years ago
  Jim Rybarski de8915fd6b simplified even more 9 years ago
  Jim Rybarski c2cf7958e3 added requirements file 9 years ago
  jim 7fcf2a5740 #11 - partial refactor 9 years ago
  jim c7cc838663 fixed absolute start and redid logging 9 years ago
  Jim Rybarski 01783026f8 force three zoom levels 10 years ago
  jim 4c894fb21f refactored a bit 10 years ago