Jim Rybarski
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c9d3a82930
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#39: getting individual images works, however, z_level and field of view are wrong
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10 years ago |
Jim Rybarski
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4c1a4a0330
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resolves #45: implements the __len__ method
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10 years ago |
Jim Rybarski
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06d6a21586
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resolves #37: Python 3 support!
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10 years ago |
Jim Rybarski
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8733b366d8
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#39
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10 years ago |
Jim Rybarski
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095814450c
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#39 halfway implemented getitem. can you get non-cyclical field of view orders? if so that would invalidate this approach
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10 years ago |
Jim Rybarski
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ebe9b854b6
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resolves #43: removed unused NamedTuple
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10 years ago |
Jim Rybarski
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1a27e175c2
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minor fixes regarding installation
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10 years ago |
Jim Rybarski
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5cd4076ec0
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resolves #2
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10 years ago |
Jim Rybarski
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fe32c62864
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#2 finished cleaning up parser
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10 years ago |
Jim Rybarski
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d5c8eb5cd1
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#2 finished comments and cleanup of public interface
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10 years ago |
Jim Rybarski
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e6471f5a1f
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#2 finished comments and cleanup of image and image set
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10 years ago |
jim
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ffb3f43f7f
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#2 added reprs
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10 years ago |
jim
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2861d551cb
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#2 moved count methods to parser and fixed subtle bug in method that filtered out gap images
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10 years ago |
Jim Rybarski
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98391dc3c0
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refactored the way images are validated
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10 years ago |
Jim Rybarski
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0dcb18ce00
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changed log level
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10 years ago |
Jim Rybarski
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a8a0d2a083
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added repr
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10 years ago |
Jim Rybarski
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50a6de765b
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removed test lines
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10 years ago |
Jim Rybarski
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3d387a23c1
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resolves #4
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10 years ago |
Jim Rybarski
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99c26b474f
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added makefile, simplified the Dockerfile
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10 years ago |
jim
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7b88c9104e
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fixed typos
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10 years ago |
jim
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bc8afedcf9
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resolves #23 - fixed bug due to improperly refactored logic condition
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10 years ago |
jim
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3c0e4a45f1
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resolves #19 - more efficient checking of spacer images
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10 years ago |
jim
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e995f4b6f4
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resolves #16 removed scikit image reference, deleted obsolete files
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10 years ago |
Jim Rybarski
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9aadde5739
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deleted unused method
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10 years ago |
Jim Rybarski
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d06153fa0d
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much refactor. very change
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10 years ago |
jim
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46b1cdb933
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#11 eliminated the messy parts of the parser, mostly
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10 years ago |
jim
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5930c63e51
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#11 made parser section more readable
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10 years ago |
Jim Rybarski
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de8915fd6b
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simplified even more
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10 years ago |
Jim Rybarski
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26ff38d039
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created dockerfile
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10 years ago |
Jim Rybarski
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c2cf7958e3
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added requirements file
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10 years ago |
jim
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7fcf2a5740
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#11 - partial refactor
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10 years ago |
jim
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b5a84b8059
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resolves #5: removed two unnecessary array typecasting operations
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10 years ago |
jim
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c7cc838663
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fixed absolute start and redid logging
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10 years ago |
jim
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719fe46f86
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extract absolute start time of acquisition
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10 years ago |
jim
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33a604b4e3
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added field of view to image properties
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10 years ago |
jim
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f4c379f685
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added channel name convenience method
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10 years ago |
Jim Rybarski
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b7bc954248
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Fixed bug where ND2s having only one channel couldn't be opened
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10 years ago |
jim
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5ef69bca41
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resolves #1 hopefully
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10 years ago |
Jim Rybarski
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01783026f8
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force three zoom levels
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10 years ago |
jim
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4a0a2c57c1
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removed logs
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10 years ago |
jim
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e7e2682949
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added some properties to Image
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10 years ago |
jim
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d44968ade6
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fixed error where non-deleted fields of view woudn't work
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10 years ago |
jim
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4c894fb21f
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refactored a bit
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10 years ago |
Jim Rybarski
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0f836acb26
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cleaned up a bit
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10 years ago |
jim
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0bd231086b
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fixed indicies - I think they might vary depending on file so this could cause problems
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10 years ago |
jim
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19b5ae5221
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made some attributes public
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10 years ago |
Jim Rybarski
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872255c61c
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sorta built new parser
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10 years ago |
jim
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b4878e28dc
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made a test model just to figure out how to refactor things
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10 years ago |
jim
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b0fb161355
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added public access to field of view count
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10 years ago |
jim
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57940efae0
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got image set iteration working
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10 years ago |