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zolfa-nd2reader
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Commit Graph

151 Commits (00cc8694979fbaefe3393a3c9a1f35213d692e0d)

Author SHA1 Message Date
  jim fd3c67d65b resolves #112: removed ImageGroup object and image_sets method, as they were deprecated because of their general uselessness 9 years ago
  Jim Rybarski 90ae0907de resolves #106: implemented missing method and added tests 9 years ago
  Jim Rybarski 284f6775de resolves #103: ND2s with a single image could not be parsed properly as they do not contain any dimension data, so when absent we can assume a single frame exists 9 years ago
  jim 2e6611b027 #101: Shows the text "Created:" even if there is no creation date 9 years ago
  jim c3a3cbadd4 resolves #101: No longer assumes a date will always be present in the metadata and falls back by displayed "Unknown" in the Nd2 repr 9 years ago
  Jim Rybarski 70467b9661 Added functional tests 9 years ago
  Jim Rybarski 6b859bd7ba updated docs, minor bug fixes, added unit tests 9 years ago
  Jim Rybarski 963310178d fixed merge conflict and docs 9 years ago
  Jim Rybarski d49c5f03eb #96: documentation changes 9 years ago
  Jim Rybarski a9ccdb19ce resolves #96: added context manager 9 years ago
  Jim Rybarski 2b2ad95a82 fixed syntax errors 9 years ago
  Jim Rybarski ac91d388c1 cleaned up a bit 9 years ago
  jim e55029c1de resolves #90 9 years ago
  jim 70e7f7a1b2 added data attribute back with deprecation warning 9 years ago
  jim 89d78030f1 #66 resolves v3 driver refactor 9 years ago
  jim 4ec54183d1 #66 fixed import problems 9 years ago
  jim 12512a5a1a #66 lol 9 years ago
  jim 45c148a1d3 #66 even more refactoring 9 years ago
  jim 544fd974eb #66 more refactoring 9 years ago
  jim 177530d657 #66 refactored init 9 years ago
  jim c096653a92 #66 interface refactoring is complete except for comments 9 years ago
  jim 949d0612d4 #66 began enormous refactor to support multiple versions of ND2s in an elegant way 9 years ago
  jim 55a3222e4f resolves #81: images now include the frame number (formerly called the time index). This tells you what order a particular image appeared in its field of view, which is useful when you're considering fields of view as independent regions of interest. Also fixed a bug where the number of image cycles (which should be renamed to "frames") was incorrect for some nd2s. 9 years ago
  jim 86d2924d35 resolves #68: indexing was not returning the correct image and skipped frame entirely when there were multiple channels 9 years ago
  jim 74dc101776 resolves #77: fixes bug where an nd2 with a single cycle or z-level wouldn't work 9 years ago
  Jim Rybarski 49737f678f resolves #56 9 years ago
  jim 18bb3f5392 resolves #54: raises Index error when you go out of bounds 9 years ago
  jim 047af59a1a #42 many passing tests for calculate_channel 9 years ago
  jim 07e2297aaf #42 fixed dockerfile and makefile, got one passing test 9 years ago
  jim ae09b688b2 #42 refactored and tidied up a bit, created test files 9 years ago
  Jim Rybarski a40b243abb resolves #40: adds slicing semantics 9 years ago
  Jim Rybarski 454f5529fe #39 fixed image sets 9 years ago
  Jim Rybarski 89ddce3a7b resolves #39 9 years ago
  Jim Rybarski 0f9c6128e3 #39: field of view works 9 years ago
  Jim Rybarski e8cb08f4cc #39: calculating channel and z_level works right 9 years ago
  Jim Rybarski c9d3a82930 #39: getting individual images works, however, z_level and field of view are wrong 9 years ago
  Jim Rybarski 4c1a4a0330 resolves #45: implements the __len__ method 9 years ago
  Jim Rybarski 06d6a21586 resolves #37: Python 3 support! 9 years ago
  Jim Rybarski 8733b366d8 #39 9 years ago
  Jim Rybarski 095814450c #39 halfway implemented getitem. can you get non-cyclical field of view orders? if so that would invalidate this approach 9 years ago
  Jim Rybarski ebe9b854b6 resolves #43: removed unused NamedTuple 9 years ago
  Jim Rybarski 1a27e175c2 minor fixes regarding installation 9 years ago
  Jim Rybarski 5cd4076ec0 resolves #2 9 years ago
  Jim Rybarski fe32c62864 #2 finished cleaning up parser 9 years ago
  Jim Rybarski d5c8eb5cd1 #2 finished comments and cleanup of public interface 9 years ago
  Jim Rybarski e6471f5a1f #2 finished comments and cleanup of image and image set 9 years ago
  jim ffb3f43f7f #2 added reprs 9 years ago
  jim 2861d551cb #2 moved count methods to parser and fixed subtle bug in method that filtered out gap images 9 years ago
  Jim Rybarski 98391dc3c0 refactored the way images are validated 9 years ago
  Jim Rybarski 0dcb18ce00 changed log level 9 years ago