Commit Graph

  • 9eb8a4b Merge pull request #53 from jimrybarski/42-feature-unittests by Jim Rybarski 2015-06-03 14:20:34 -0500
  • c16dccd #42 tests for calculate_z_level by jim 2015-06-03 14:15:29 -0500
  • 8ae2bf6 #42 added simple calculate_channel test by jim 2015-06-03 14:02:55 -0500
  • 047af59 #42 many passing tests for calculate_channel by jim 2015-06-03 14:01:29 -0500
  • 2b62ed4 #42 many passing tests for calculate_field_of_view by jim 2015-06-03 13:48:26 -0500
  • 07e2297 #42 fixed dockerfile and makefile, got one passing test by jim 2015-06-03 13:32:01 -0500
  • ae09b68 #42 refactored and tidied up a bit, created test files by jim 2015-06-03 12:56:11 -0500
  • 5104a23 combined python2.7 and 3.4 into one Dockerfile since it's just for testing anyway by Jim Rybarski 2015-06-02 01:37:38 +0000
  • 3f126da two dockerfiles as prelude to testing by Jim Rybarski 2015-05-31 06:21:45 +0000
  • c78d367 Merge pull request #51 from jimrybarski/40-feature-slices by Jim Rybarski 2015-05-31 00:44:16 -0500
  • a40b243 resolves #40: adds slicing semantics by Jim Rybarski 2015-05-31 05:31:06 +0000
  • 3e0d788 Merge pull request #50 from jimrybarski/39-feature-getitem by Jim Rybarski 2015-05-30 23:47:05 -0500
  • 454f552 #39 fixed image sets by Jim Rybarski 2015-05-31 04:45:02 +0000
  • 89ddce3 resolves #39 by Jim Rybarski 2015-05-31 04:43:06 +0000
  • 0f9c612 #39: field of view works by Jim Rybarski 2015-05-31 04:00:11 +0000
  • e8cb08f #39: calculating channel and z_level works right by Jim Rybarski 2015-05-31 03:14:05 +0000
  • c9d3a82 #39: getting individual images works, however, z_level and field of view are wrong by Jim Rybarski 2015-05-31 02:31:11 +0000
  • d1b4b0b merged changes from dev by Jim Rybarski 2015-05-30 20:45:55 -0500
  • 5db4a79 Merge pull request #49 from jimrybarski/dev by Jim Rybarski 2015-05-30 20:35:57 -0500
  • 1e49757 Merge pull request #48 from jimrybarski/45-feature-len by Jim Rybarski 2015-05-30 20:35:23 -0500
  • 4c1a4a0 resolves #45: implements the __len__ method by Jim Rybarski 2015-05-31 01:33:58 +0000
  • 7593b5a Merge pull request #47 from jimrybarski/dev by Jim Rybarski 2015-05-30 20:26:06 -0500
  • b8c75b2 Merge pull request #46 from jimrybarski/37-python3-support by Jim Rybarski 2015-05-30 20:23:53 -0500
  • 06d6a21 resolves #37: Python 3 support! by Jim Rybarski 2015-05-31 01:21:47 +0000
  • 8733b36 #39 by Jim Rybarski 2015-05-30 22:35:09 +0000
  • 0958144 #39 halfway implemented getitem. can you get non-cyclical field of view orders? if so that would invalidate this approach by Jim Rybarski 2015-05-26 06:05:41 +0000
  • 747cdb6 Merge pull request #44 from jimrybarski/43-prune-unused-code by Jim Rybarski 2015-05-25 22:10:37 -0500
  • ebe9b85 resolves #43: removed unused NamedTuple by Jim Rybarski 2015-05-26 03:10:02 +0000
  • 9222a34 Merge pull request #38 from jimrybarski/master by Jim Rybarski 2015-05-23 16:18:21 -0500
  • 726db80 Update README.md by Jim Rybarski 2015-05-23 16:12:58 -0500
  • 5daf8a3 better install by Jim Rybarski 2015-05-23 20:51:38 +0000
  • 03652f8 fixed install by Jim Rybarski 2015-05-23 20:43:02 +0000
  • bcaf9ca fixed typo by Jim Rybarski 2015-05-23 20:38:17 +0000
  • f975a7d fixed version number by Jim Rybarski 2015-05-23 20:31:31 +0000
  • ca6822b switched to setuptools to automatically install numpy by Jim Rybarski 2015-05-23 20:29:48 +0000
  • 9aba09d Merge pull request #36 from jimrybarski/dev by Jim Rybarski 2015-05-23 14:55:09 -0500
  • e7a2f82 Merge pull request #35 from jimrybarski/pypi-refactor by Jim Rybarski 2015-05-23 14:54:33 -0500
  • 1a27e17 minor fixes regarding installation by Jim Rybarski 2015-05-23 19:50:23 +0000
  • 3b491db Merge pull request #34 from jimrybarski/26-feature-setup-py by Jim Rybarski 2015-05-23 14:21:22 -0500
  • fde3f02 #26 fix installation by Jim Rybarski 2015-05-23 19:19:01 +0000
  • f3ebf77 resolves #26 by Jim Rybarski 2015-05-23 19:14:16 +0000
  • a254848 Merge pull request #33 from jimrybarski/27-write-good-readme by Jim Rybarski 2015-05-23 13:53:24 -0500
  • 5791d5f #27 fixed formatting error by Jim Rybarski 2015-05-23 18:52:07 +0000
  • c3d659c #27 added contribution instructions by Jim Rybarski 2015-05-23 18:51:08 +0000
  • b182e4a #27 more sensible example by Jim Rybarski 2015-05-23 18:37:31 +0000
  • 1daac4a #27 syntax highlighting by Jim Rybarski 2015-05-23 18:33:53 +0000
  • ae06dca #27 better instructions by Jim Rybarski 2015-05-23 18:32:27 +0000
  • b4c01b7 #27 began writing tutorial by Jim Rybarski 2015-05-23 18:20:22 +0000
  • e2fadc1 Merge pull request #32 from jimrybarski/14-feature-unit-tests by Jim Rybarski 2015-05-23 12:48:35 -0500
  • 44e5217 realized unit testing isn't even worth it here. yeah, I said that. quote me on it. by Jim Rybarski 2015-05-23 17:47:51 +0000
  • c9abc00 Merge pull request #31 from jimrybarski/2-rename-things by Jim Rybarski 2015-05-23 12:40:58 -0500
  • 5cd4076 resolves #2 by Jim Rybarski 2015-05-23 17:38:49 +0000
  • fe32c62 #2 finished cleaning up parser by Jim Rybarski 2015-05-23 17:28:35 +0000
  • d5c8eb5 #2 finished comments and cleanup of public interface by Jim Rybarski 2015-05-23 16:55:04 +0000
  • e6471f5 #2 finished comments and cleanup of image and image set by Jim Rybarski 2015-05-23 16:25:19 +0000
  • ffb3f43 #2 added reprs by jim 2015-05-17 19:41:37 -0500
  • 2861d55 #2 moved count methods to parser and fixed subtle bug in method that filtered out gap images by jim 2015-05-17 19:34:13 -0500
  • 98391dc refactored the way images are validated by Jim Rybarski 2015-05-17 05:51:23 +0000
  • 0dcb18c changed log level by Jim Rybarski 2015-05-17 05:31:38 +0000
  • a8a0d2a added repr by Jim Rybarski 2015-05-17 05:28:16 +0000
  • 2f5871b Merge pull request #29 from jimrybarski/4-feature-image-set-storage by Jim Rybarski 2015-05-17 00:02:23 -0500
  • 50a6de7 removed test lines by Jim Rybarski 2015-05-17 05:01:52 +0000
  • 3d387a2 resolves #4 by Jim Rybarski 2015-05-17 04:59:41 +0000
  • 99c26b4 added makefile, simplified the Dockerfile by Jim Rybarski 2015-05-16 23:42:59 +0000
  • 5286abc license and attribution by jim 2015-05-11 15:04:09 -0500
  • c9e53c4 attribution to original authors by jim 2015-05-11 14:42:52 -0500
  • 7b88c91 fixed typos by jim 2015-05-11 12:18:55 -0500
  • a222b4c Merge pull request #25 from jimrybarski/19-detect-bad-images-at-runtime by Jim Rybarski 2015-05-11 12:13:49 -0500
  • a037e09 Merge branch 'pypi-refactor' of https://github.com/jimrybarski/nd2reader into 19-detect-bad-images-at-runtime by jim 2015-05-11 12:13:09 -0500
  • f037a77 Merge pull request #24 from jimrybarski/23-bug-revert-deletion by Jim Rybarski 2015-05-11 12:10:25 -0500
  • bc8afed resolves #23 - fixed bug due to improperly refactored logic condition by jim 2015-05-11 11:47:40 -0500
  • 3c0e4a4 resolves #19 - more efficient checking of spacer images by jim 2015-05-11 09:16:58 -0500
  • b328dec Merge pull request #22 from jimrybarski/16-remove-skimage by Jim Rybarski 2015-05-11 09:06:55 -0500
  • e995f4b resolves #16 removed scikit image reference, deleted obsolete files by jim 2015-05-11 09:06:06 -0500
  • 2c0981f Merge pull request #20 from jimrybarski/11-refactor by Jim Rybarski 2015-05-11 07:58:26 -0500
  • 9aadde5 deleted unused method by Jim Rybarski 2015-05-11 12:54:43 +0000
  • d06153f much refactor. very change by Jim Rybarski 2015-05-11 12:50:03 +0000
  • 46b1cdb #11 eliminated the messy parts of the parser, mostly by jim 2015-05-10 16:09:21 -0500
  • 5930c63 #11 made parser section more readable by jim 2015-05-10 15:08:30 -0500
  • de8915f simplified even more by Jim Rybarski 2015-05-10 18:33:18 +0000
  • 26ff38d created dockerfile by Jim Rybarski 2015-05-07 23:08:42 -0500
  • c2cf795 added requirements file by Jim Rybarski 2015-05-08 02:57:08 +0000
  • 7fcf2a5 #11 - partial refactor by jim 2015-04-26 18:51:41 -0500
  • 63eb05f Merge pull request #18 from jimrybarski/5-bug-change-datatype by Jim Rybarski 2015-04-26 18:20:07 -0500
  • b5a84b8 resolves #5: removed two unnecessary array typecasting operations by jim 2015-04-26 18:16:11 -0500
  • c5fb8b9 Merge pull request #15 from jimrybarski/dev by Jim Rybarski 2015-04-26 18:03:46 -0500
  • 3b57cb6 Merge pull request #10 from jimrybarski/7-bug-delete-idea by Jim Rybarski 2015-04-20 21:40:24 -0500
  • 9b0910f resolves #7 - deleted pycharm metadata by Jim Rybarski 2015-04-20 21:39:53 -0500
  • 4533a92 created dev branch by Jim Rybarski 2015-04-20 21:37:30 -0500
  • c7cc838 fixed absolute start and redid logging by jim 2015-04-15 11:42:19 -0500
  • 719fe46 extract absolute start time of acquisition by jim 2015-04-08 11:40:44 -0500
  • 33a604b added field of view to image properties by jim 2015-03-18 17:08:33 -0500
  • f4c379f added channel name convenience method by jim 2015-03-04 09:53:57 -0600
  • b7bc954 Fixed bug where ND2s having only one channel couldn't be opened by Jim Rybarski 2015-01-27 22:07:32 -0600
  • 78eae09 Merge pull request #8 from jimrybarski/1-bad-dimensions by Jim Rybarski 2015-01-27 18:17:55 -0600
  • 5ef69bc resolves #1 hopefully by jim 2015-01-27 18:17:31 -0600
  • 3603e08 Merge remote-tracking branch 'origin/master' by jim 2015-01-27 14:26:25 -0600
  • c61f6f0 fixed error where non-deleted fields of view woudn't work by jim 2014-12-22 15:38:39 -0600
  • f3cefd7 Update README.md by Jim Rybarski 2014-12-21 18:19:37 -0600
  • 0178302 force three zoom levels by Jim Rybarski 2014-12-16 08:45:17 -0600