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1 Commits (f220515eb6fa438f45c432530290c8b840e150ff)

Author SHA1 Message Date
  Zolfa f220515eb6 complete fork: nd2reader -> nd2reader2 2 years ago
  Zolfa 831a16983a Add functions to read only rectangular regions. 3 years ago
  Gabriele Girelli 11badb3ee5 Fixed missing filename path. 4 years ago
  Gabriele Girelli a5faf7663a Fixed new init method 4 years ago
  Gabriele Girelli 4f11f3f4d0 Allowed for fh to be either str or IO, and formatted with black. 4 years ago
  Gabriele Girelli 20d7faa6dc Regenerated Reader 4 years ago
  Gabriele Girelli 9d40a12f96 Fixed complexity 4 years ago
  Gabriele Girelli 59a99a8f0e Update reader.py 4 years ago
  Ruben Verweij e309631c84 Use timesteps as fallback to NDExperiment loops to determine total file duration, and thus framerate 4 years ago
  Gabriele Girelli 90a4ffc747 f-strings not supported by Python3.6- 4 years ago
  Ulugbek Abdullaev 9059a15781 add a check that filename passed to nd2reader has an extension .nd2 because the current implementation raises InvalidVersionError if the passed file is non-nd2 type, which is misleading 5 years ago
  Gabriele Girelli fe2bb5932c Removed self.__class__ from super() call 4 years ago
  Ruben Verweij 4d9bc03c44 Resolve issue #24 5 years ago
  Ruben Verweij 31f80554b1 Issue #24: only return a Frame when bundle_axes is only y,x 5 years ago
  Ruben Verweij 322969bceb Update get_frame_vczyx function based on feedback in issue #24 5 years ago
  Ruben Verweij 38a0def075 Fixes issue 25 5 years ago
  Ruben Verweij 54cce884c1 Fix issue with bundle_axes and get_frame 5 years ago
  Ruben Verweij 3e4845b309 Fallback function for old get_frame_2D function 5 years ago
  Ruben Verweij faa495ecdb Use _register_get_frame functions 5 years ago
  Gregor Lichtner 4efd9a2ea4 added image events to parser 5 years ago
  jbf81tb 75f19554e4 get_frame_2D fix 5 years ago
  Ruben Verweij f9665259df Fix fps calculation 5 years ago
  Ruben Verweij 93f886e9e9 Fix to take into account real acquisition times when calculating framerate instead of the set interval (which is sometimes inaccurate) 6 years ago
  Ruben Verweij 5673262295 New release 6 years ago
  Ruben Verweij 731a05214a Fix #4 6 years ago
  Ruben Verweij 86bd2eb99d Version 3.0.6: Add FOV support 7 years ago
  Ruben Verweij 81b785d1e7 Test legacy Nd2, parser, reader fixes 7 years ago
  Ruben Verweij 85e15ac86b Add a class priority so this reader will be loaded before the Bioformats reader 7 years ago
  Ruben Verweij 8c84fa6c17 Fix imports of pims and release 3.0.4 7 years ago
  Ruben Verweij 94e10dbe1f Cache timesteps and add frame rate property 7 years ago
  Ruben Verweij bce39c1acc Always set 't' axis 7 years ago
  Ruben Verweij 5f77688aed Only setup certain axes if size > 1 7 years ago
  Ruben Verweij 16288909b9 Issue #2: clean up axes handling, guess a better default axis 7 years ago
  Ruben Verweij b7c60e3a27 Fix issue #2 by following PIMS conventions more closely 7 years ago
  Ruben Verweij 10c2589348 Do not add 'z' to sizes of the reader if there is only one plane, as seems to be the PIMS convention 7 years ago
  Ruben Verweij f88965ce8d Fix the number of frames 7 years ago
  Ruben Verweij 0ba84df3f9 Bump version number to reflect api changes 7 years ago
  Ruben Verweij 2c121dc0ff New documentation 7 years ago
  Ruben Verweij aa7e05f1d2 Very basic Reader test 7 years ago
  Ruben Verweij c6e5a13a0d Provide backwards compatibility with old 2.1.3 version 7 years ago
  Ruben Verweij 480432df50 Improve documentation 7 years ago
  Ruben Verweij 2f2f138f17 docstrings 7 years ago
  Ruben Verweij 60378ad06f Cleanup docstrings to use google python docs 7 years ago
  Ruben Verweij 4841c09eb7 Correctly parse experiment data for NDAqcuisition and add get_timesteps function to reader 7 years ago
  Ruben Verweij 0ba13656de Add ability to bundle the color axis 7 years ago
  Ruben Verweij a398edf699 Add ability to bundle the color axis 7 years ago
  Ruben Verweij 8f513fde74 Add unit tests for opening files and axis sizes 7 years ago
  Ruben Verweij a716471131 Small fixes 7 years ago
  Ruben Verweij 63a286d167 Hopefully fix Python 2 import error 7 years ago
  Ruben Verweij 685afb16ab Rename exceptions 7 years ago