Ruben Verweij
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731a05214a
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Fix #4
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7 years ago |
Ruben Verweij
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86bd2eb99d
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Version 3.0.6: Add FOV support
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7 years ago |
Ruben Verweij
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81b785d1e7
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Test legacy Nd2, parser, reader fixes
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7 years ago |
Ruben Verweij
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85e15ac86b
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Add a class priority so this reader will be loaded before the Bioformats reader
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7 years ago |
Ruben Verweij
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8c84fa6c17
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Fix imports of pims and release 3.0.4
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8 years ago |
Ruben Verweij
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94e10dbe1f
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Cache timesteps and add frame rate property
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8 years ago |
Ruben Verweij
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bce39c1acc
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Always set 't' axis
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8 years ago |
Ruben Verweij
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5f77688aed
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Only setup certain axes if size > 1
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8 years ago |
Ruben Verweij
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16288909b9
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Issue #2: clean up axes handling, guess a better default axis
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8 years ago |
Ruben Verweij
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b7c60e3a27
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Fix issue #2 by following PIMS conventions more closely
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8 years ago |
Ruben Verweij
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10c2589348
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Do not add 'z' to sizes of the reader if there is only one plane, as seems to be the PIMS convention
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8 years ago |
Ruben Verweij
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f88965ce8d
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Fix the number of frames
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8 years ago |
Ruben Verweij
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0ba84df3f9
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Bump version number to reflect api changes
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8 years ago |
Ruben Verweij
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2c121dc0ff
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New documentation
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8 years ago |
Ruben Verweij
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aa7e05f1d2
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Very basic Reader test
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8 years ago |
Ruben Verweij
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c6e5a13a0d
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Provide backwards compatibility with old 2.1.3 version
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8 years ago |
Ruben Verweij
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480432df50
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Improve documentation
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8 years ago |
Ruben Verweij
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2f2f138f17
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docstrings
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8 years ago |
Ruben Verweij
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60378ad06f
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Cleanup docstrings to use google python docs
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8 years ago |
Ruben Verweij
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4841c09eb7
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Correctly parse experiment data for NDAqcuisition and add get_timesteps function to reader
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8 years ago |
Ruben Verweij
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0ba13656de
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Add ability to bundle the color axis
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8 years ago |
Ruben Verweij
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a398edf699
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Add ability to bundle the color axis
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8 years ago |
Ruben Verweij
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8f513fde74
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Add unit tests for opening files and axis sizes
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8 years ago |
Ruben Verweij
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a716471131
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Small fixes
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8 years ago |
Ruben Verweij
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63a286d167
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Hopefully fix Python 2 import error
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8 years ago |
Ruben Verweij
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685afb16ab
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Rename exceptions
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8 years ago |
Ruben Verweij
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cb2c06f9a5
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Complete refactor
- use only one parser for v3 files
- merge some classes
- return metadata as raw metadata and dictionary
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8 years ago |
Ruben Verweij
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d19a9c305b
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Refactor, add metadata to Frame objects, support PIMS open function
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8 years ago |
Ruben Verweij
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7b7bf1ac25
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Start porting to PIMS framework, cleanup unnecessary files
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8 years ago |