Ruben Verweij
|
10e080da78
|
Fix issue #34
|
5 years ago |
Ruben Verweij
|
e309631c84
|
Use timesteps as fallback to NDExperiment loops to determine total file duration, and thus framerate
|
5 years ago |
Ruben Verweij
|
1b8b835332
|
Fix error in loop handling
|
5 years ago |
Ruben Verweij
|
235070c658
|
Merge pull request #32 from ulugbekna/handle-invalid-file-extension
add a check that filename passed to ND2Reader has extension .nd2
|
5 years ago |
Ulugbek Abdullaev
|
8ccbb975c8
|
Merge pull request #1 from ggirelli/patch-1
f-strings not supported by Python3.6-
|
5 years ago |
Gabriele Girelli
|
90a4ffc747
|
f-strings not supported by Python3.6-
|
5 years ago |
Ruben Verweij
|
94e028909c
|
Fix typo in z-level check
|
5 years ago |
Ulugbek Abdullaev
|
9059a15781
|
add a check that filename passed to nd2reader has an extension .nd2 because the current implementation raises InvalidVersionError if the passed file is non-nd2 type, which is misleading
add an exception InvalidFileType
add a test for the new behavior of ND2Reader constructor
|
5 years ago |
Ruben Verweij
|
e165788c14
|
Merge pull request #33 from ggirelli/master
Removed self.__class__ from super() call
|
5 years ago |
Ruben Verweij
|
8c6d77a11f
|
Fix codeclimate integration
|
5 years ago |
Ruben Verweij
|
94b83cd5f0
|
Update README.md
|
5 years ago |
Ruben Verweij
|
1cf084f7f2
|
Remove support for Python < 3.5
|
5 years ago |
Gabriele Girelli
|
fe2bb5932c
|
Removed self.__class__ from super() call
|
5 years ago |
Ruben Verweij
|
06c9c20ce1
|
Version 3.2.3 due to build error of new version number storage system
|
5 years ago |
Ruben Verweij
|
0a48885fec
|
Merge branch 'master' of github.com:rbnvrw/nd2reader
|
5 years ago |
Ruben Verweij
|
4a5965a457
|
New version 3.2.2
|
5 years ago |
Ruben Verweij
|
6d64a66c4b
|
Update release.txt
|
5 years ago |
Ruben Verweij
|
aa6a4fbc93
|
Merge pull request #30 from rbnvrw/add-code-of-conduct-1
Create CODE_OF_CONDUCT.md
|
5 years ago |
Ruben Verweij
|
099d2d5dc1
|
Create CODE_OF_CONDUCT.md
|
5 years ago |
Ruben Verweij
|
c59aeea418
|
Merge pull request #28 from ggirelli/master
Using Z slice coordinates from Z-data instead of Z-levels and show warning in case of mismatch
|
5 years ago |
Gabriele Girelli
|
399b42e383
|
Update raw_metadata.py
|
5 years ago |
Gabriele Girelli
|
898dd09e14
|
Update raw_metadata.py
Changed isinstance to is.
Fixed condition triggering warning.
|
5 years ago |
Gabriele Girelli
|
bec47a5fb6
|
Update raw_metadata.py
|
5 years ago |
Gabriele Girelli
|
df1cf09e36
|
Using Z slice coordinates from Z-data instead of Z-levels and show warning in case of mismatch
|
5 years ago |
Ruben Verweij
|
4d9bc03c44
|
Resolve issue #24
|
5 years ago |
Ruben Verweij
|
31f80554b1
|
Issue #24: only return a Frame when bundle_axes is only y,x
|
5 years ago |
Ruben Verweij
|
dc9ae0bb98
|
Merge branch 'master' of github.com:rbnvrw/nd2reader
|
5 years ago |
Ruben Verweij
|
322969bceb
|
Update get_frame_vczyx function based on feedback in issue #24
|
5 years ago |
Ruben Verweij
|
8b56bed6e0
|
Update release.txt
|
5 years ago |
Ruben Verweij
|
0d533bfb96
|
Make unit test less specific to accomodate for different versions of struct
|
5 years ago |
Ruben Verweij
|
8e0a642ed2
|
Fixes issue #25, adds unit tests and release 3.2.1
|
5 years ago |
Ruben Verweij
|
38a0def075
|
Fixes issue 25
|
5 years ago |
Ruben Verweij
|
5f04a516fb
|
Merge branch 'master' of github.com:rbnvrw/nd2reader
|
5 years ago |
Ruben Verweij
|
54cce884c1
|
Fix issue with bundle_axes and get_frame
|
5 years ago |
Ruben Verweij
|
ac93bb5ad4
|
Update release.txt
|
5 years ago |
Ruben Verweij
|
52fc791eb7
|
Update version 3.2.0
|
5 years ago |
Ruben Verweij
|
74463f535c
|
Merge branch 'master' of github.com:rbnvrw/nd2reader
|
5 years ago |
Ruben Verweij
|
09ed7a50d1
|
Version 3.2.0
|
5 years ago |
Ruben Verweij
|
c2f2e0c3e9
|
Merge pull request #22 from WMAPernice/fix-missing-frames-issue_to-current-master
Fix to allow reading of ND2-files with missing frames.
|
5 years ago |
unknown
|
17881d60f1
|
More informative warning if gap frames encountered and filled with np.nan
|
5 years ago |
unknown
|
43dbc61412
|
Handle gap frames with np.nan-filled array and issue warning about it.
|
5 years ago |
unknown
|
da185df9cd
|
removed NoImageError call, class def, and import references since now redundant
|
5 years ago |
Ruben Verweij
|
295ccf5e5b
|
Add acquisition times to parser
|
5 years ago |
Ruben Verweij
|
38d6e8ce5a
|
Fixes issue #11
|
5 years ago |
Ruben Verweij
|
6dd7f9dfe2
|
Fixes issue #16
|
5 years ago |
Ruben Verweij
|
3e4845b309
|
Fallback function for old get_frame_2D function
|
5 years ago |
unknown
|
1fed0c1fb1
|
fix to allow reading of ND2-files with missing frames, due to e.g. skipping z-positions in one channel of a multichannel image; based on most recent commit of master
|
5 years ago |
Ruben Verweij
|
faa495ecdb
|
Use _register_get_frame functions
|
6 years ago |
Ruben Verweij
|
13967ad591
|
Merge pull request #21 from glichtner/image-events
Image events
|
6 years ago |
Ruben Verweij
|
52000ce907
|
Merge pull request #20 from glichtner/valid-loops
include only valid loops in experiment metadata
|
6 years ago |