jim
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09173fcb9e
|
resolves #110: added comments and parameter types to every method with a few minor exceptions where it's super obvious and unimportant what's happening
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9 years ago |
jim
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cc2a49ac6d
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#110 added many comments, fixed parameter names where frame_number was incorrectly used in place of index
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9 years ago |
jim
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7c0c8be065
|
resolves #119: removed some commented-out code and an unused import
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9 years ago |
jim
|
fd3c67d65b
|
resolves #112: removed ImageGroup object and image_sets method, as they were deprecated because of their general uselessness
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9 years ago |
Jim Rybarski
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90ae0907de
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resolves #106: implemented missing method and added tests
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9 years ago |
jim
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2e6611b027
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#101: Shows the text "Created:" even if there is no creation date
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9 years ago |
jim
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c3a3cbadd4
|
resolves #101: No longer assumes a date will always be present in the metadata and falls back by displayed "Unknown" in the Nd2 repr
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9 years ago |
Jim Rybarski
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963310178d
|
fixed merge conflict and docs
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9 years ago |
Jim Rybarski
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d49c5f03eb
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#96: documentation changes
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9 years ago |
Jim Rybarski
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a9ccdb19ce
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resolves #96: added context manager
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9 years ago |
Jim Rybarski
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2b2ad95a82
|
fixed syntax errors
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9 years ago |
Jim Rybarski
|
ac91d388c1
|
cleaned up a bit
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9 years ago |
jim
|
e55029c1de
|
resolves #90
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9 years ago |
jim
|
544fd974eb
|
#66 more refactoring
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9 years ago |
jim
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177530d657
|
#66 refactored init
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9 years ago |
jim
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c096653a92
|
#66 interface refactoring is complete except for comments
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9 years ago |
jim
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949d0612d4
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#66 began enormous refactor to support multiple versions of ND2s in an elegant way
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9 years ago |
jim
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55a3222e4f
|
resolves #81: images now include the frame number (formerly called the time index). This tells you what order a particular image appeared in its field of view, which is useful when you're considering fields of view as independent regions of interest. Also fixed a bug where the number of image cycles (which should be renamed to "frames") was incorrect for some nd2s.
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9 years ago |
jim
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86d2924d35
|
resolves #68: indexing was not returning the correct image and skipped frame entirely when there were multiple channels
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9 years ago |
Jim Rybarski
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49737f678f
|
resolves #56
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10 years ago |
jim
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18bb3f5392
|
resolves #54: raises Index error when you go out of bounds
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10 years ago |
jim
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07e2297aaf
|
#42 fixed dockerfile and makefile, got one passing test
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10 years ago |
jim
|
ae09b688b2
|
#42 refactored and tidied up a bit, created test files
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10 years ago |
Jim Rybarski
|
a40b243abb
|
resolves #40: adds slicing semantics
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10 years ago |
Jim Rybarski
|
454f5529fe
|
#39 fixed image sets
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10 years ago |
Jim Rybarski
|
89ddce3a7b
|
resolves #39
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10 years ago |
Jim Rybarski
|
0f9c6128e3
|
#39: field of view works
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10 years ago |
Jim Rybarski
|
e8cb08f4cc
|
#39: calculating channel and z_level works right
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10 years ago |
Jim Rybarski
|
c9d3a82930
|
#39: getting individual images works, however, z_level and field of view are wrong
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10 years ago |
Jim Rybarski
|
4c1a4a0330
|
resolves #45: implements the __len__ method
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10 years ago |
Jim Rybarski
|
06d6a21586
|
resolves #37: Python 3 support!
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10 years ago |
Jim Rybarski
|
8733b366d8
|
#39
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10 years ago |
Jim Rybarski
|
095814450c
|
#39 halfway implemented getitem. can you get non-cyclical field of view orders? if so that would invalidate this approach
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10 years ago |
Jim Rybarski
|
fe32c62864
|
#2 finished cleaning up parser
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10 years ago |
Jim Rybarski
|
d5c8eb5cd1
|
#2 finished comments and cleanup of public interface
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10 years ago |
jim
|
ffb3f43f7f
|
#2 added reprs
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10 years ago |
jim
|
2861d551cb
|
#2 moved count methods to parser and fixed subtle bug in method that filtered out gap images
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10 years ago |
Jim Rybarski
|
98391dc3c0
|
refactored the way images are validated
|
10 years ago |
Jim Rybarski
|
0dcb18ce00
|
changed log level
|
10 years ago |
Jim Rybarski
|
a8a0d2a083
|
added repr
|
10 years ago |
Jim Rybarski
|
50a6de765b
|
removed test lines
|
10 years ago |
Jim Rybarski
|
3d387a23c1
|
resolves #4
|
10 years ago |
jim
|
7b88c9104e
|
fixed typos
|
10 years ago |
Jim Rybarski
|
9aadde5739
|
deleted unused method
|
10 years ago |
Jim Rybarski
|
d06153fa0d
|
much refactor. very change
|
10 years ago |
Jim Rybarski
|
de8915fd6b
|
simplified even more
|
10 years ago |
Jim Rybarski
|
c2cf7958e3
|
added requirements file
|
10 years ago |
jim
|
7fcf2a5740
|
#11 - partial refactor
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10 years ago |
jim
|
c7cc838663
|
fixed absolute start and redid logging
|
10 years ago |
Jim Rybarski
|
01783026f8
|
force three zoom levels
|
10 years ago |