Jim Rybarski
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aedfa921a5
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resolves #117. The XML-formatted strings in a few raw_metadata are now parsed into OrderedDicts. This isn't exposed to the user but if we want to add any of the data it will be more convenient for contributors to examine the contents of the data
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9 years ago |
Jim Rybarski
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c697efb3fd
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added python2.7 virtualenv to gitignore
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9 years ago |
Jim Rybarski
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482a30abd8
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bumped version number to 2.0.0
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9 years ago |
Jim Rybarski
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8f24b139e0
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Merge pull request #127 from jimrybarski/114-fast-filter
114 fast filter
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9 years ago |
Jim Rybarski
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f366f38009
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resolves #114. added index to Images to help with testing. Increased test coverage for filter()
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9 years ago |
Jim Rybarski
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e141b0504c
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#114: wrote fast filter that works, but we need way more testing for corner cases
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9 years ago |
Jim Rybarski
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bda7af4bdc
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Merge pull request #126 from jimrybarski/125-more-metadata
125 more metadata
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9 years ago |
Jim Rybarski
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f256a3a03d
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resolves #125
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9 years ago |
Jim Rybarski
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1b6b9ac84c
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#125: updated docs
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9 years ago |
Jim Rybarski
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2d8b340806
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Merge branch '2.0' into 125-more-metadata
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9 years ago |
Jim Rybarski
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1268b2768c
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#125: fixed bug by ordering channel names, which works but seems suspect. added py2 support to Dockerfile
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9 years ago |
Jim Rybarski
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04873ea9a5
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Merge branch 'master' into 2.0
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9 years ago |
Jim Rybarski
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e016c8e321
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more consistent documentation
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9 years ago |
Jim Rybarski
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852a26091c
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reordered documentation
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9 years ago |
Jim Rybarski
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bd3725dc9b
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fixed some typos
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9 years ago |
Jim Rybarski
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a1704c53cb
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made a few readme updates and clarified documentation
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9 years ago |
Jim Rybarski
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1436068d4c
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#125: refactored to make adding more metadata easier
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9 years ago |
jim
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5196c7d2c7
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#125 decoded much more metadata and also found pointers to XML data
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9 years ago |
Jim Rybarski
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947c7c136e
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Merge pull request #124 from jimrybarski/123-expose-label-map
123 expose label map
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9 years ago |
jim
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4943a854f1
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resolves #123: the label map and raw metadata are now accessible, so we can more easily compare what they contain to the information in the XML (which we're still not parsing)
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9 years ago |
jim
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e9ff0915bf
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#123 switched to the new LabelMap object, added support for another metadata field
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9 years ago |
jim
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9548b92957
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#123: created label map object, which parses the pointers to locations in the file where data is stored
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9 years ago |
Jim Rybarski
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3bc9adcc77
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Merge pull request #122 from jimrybarski/110-comments
110 comments
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9 years ago |
jim
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09173fcb9e
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resolves #110: added comments and parameter types to every method with a few minor exceptions where it's super obvious and unimportant what's happening
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9 years ago |
jim
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cc2a49ac6d
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#110 added many comments, fixed parameter names where frame_number was incorrectly used in place of index
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9 years ago |
Jim Rybarski
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037a87ac09
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Merge pull request #121 from jimrybarski/113-remove-deprecated-function
resolves #113: removed `.data` property from images now that they sim…
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9 years ago |
jim
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a102f6189b
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resolves #113: removed `.data` property from images now that they simply behave like numpy arrays
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9 years ago |
Jim Rybarski
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0edaee5536
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Merge pull request #120 from jimrybarski/119-remove-commented-out-code
resolves #119: removed some commented-out code and an unused import
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9 years ago |
jim
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7c0c8be065
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resolves #119: removed some commented-out code and an unused import
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9 years ago |
Jim Rybarski
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c25798ecf5
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Merge pull request #118 from jimrybarski/112-remove-image-group
resolves #112: removed ImageGroup object and image_sets method, as th…
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9 years ago |
jim
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fd3c67d65b
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resolves #112: removed ImageGroup object and image_sets method, as they were deprecated because of their general uselessness
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9 years ago |
Jim Rybarski
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07aa008623
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Merge pull request #116 from jimrybarski/108-better-install-instructions
108 better install instructions
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9 years ago |
Jim Rybarski
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de4e348f22
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#108 close spacing is impossible
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9 years ago |
Jim Rybarski
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fc7e8aadd4
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#108 tighter spacing
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9 years ago |
Jim Rybarski
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6d3c3dbb82
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#108 fixes newline
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9 years ago |
Jim Rybarski
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9ff5cce513
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resolves #108
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9 years ago |
Jim Rybarski
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6efa9aa257
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#108 changed installation text
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9 years ago |
Jim Rybarski
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b1bd96df05
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Incremented version to 1.1.4
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9 years ago |
Jim Rybarski
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b903b56fd5
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Added section header
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9 years ago |
Jim Rybarski
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04ea94f881
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Merge remote-tracking branch 'origin/master'
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9 years ago |
Jim Rybarski
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1739b11bcf
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Made publishing to PyPI easier and made minor README edit
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9 years ago |
Jim Rybarski
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4188d6694a
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Merge pull request #107 from jimrybarski/106-bug-open-file-by-attributes
resolves #106: implemented missing method and added tests
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9 years ago |
Jim Rybarski
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90ae0907de
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resolves #106: implemented missing method and added tests
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9 years ago |
Jim Rybarski
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1e22e12fee
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Merge pull request #104 from jimrybarski/103-single-image
resolves #103: ND2s with a single image could not be parsed properly …
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9 years ago |
Jim Rybarski
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284f6775de
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resolves #103: ND2s with a single image could not be parsed properly as they do not contain any dimension data, so when absent we can assume a single frame exists
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9 years ago |
Jim Rybarski
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eb02123287
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Merge pull request #102 from jimrybarski/101-dont-require-date
101 dont require date
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9 years ago |
jim
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2e6611b027
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#101: Shows the text "Created:" even if there is no creation date
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9 years ago |
jim
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c3a3cbadd4
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resolves #101: No longer assumes a date will always be present in the metadata and falls back by displayed "Unknown" in the Nd2 repr
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9 years ago |
Jim Rybarski
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2792663cb5
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fixed minor testing issues
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9 years ago |
Jim Rybarski
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7eb24c188a
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fixed installer
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9 years ago |