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zolfa-nd2reader
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38 Commits (f5301c039d8c89446841aa91005141eae9ec4b03)

Author SHA1 Message Date
  Ruben Verweij d4e505779d Issue #2: clean up axes handling, guess a better default axis 8 years ago
  Ruben Verweij 45674ff241 Do not add 'z' to sizes of the reader if there is only one plane, as seems to be the PIMS convention 8 years ago
  Ruben Verweij 0bd5bdc0fd version 3.0.1: Include LICENSE via MANIFEST.in for conda forge 8 years ago
  Ruben Verweij 325ad5f8a6 Add test for raw metadata storage 8 years ago
  Ruben Verweij da38f7cd66 Add more unit test for common + fix possibly endless loop 8 years ago
  Ruben Verweij 3590a7ec6b Fix creating test file for unit tests 8 years ago
  Ruben Verweij b640490de1 Bug fixes by testing different .nd2 files 8 years ago
  Ruben Verweij a5417099b0 Extend unit tests 8 years ago
  Ruben Verweij 5251464df5 Extend unit tests 8 years ago
  Ruben Verweij b0f22eb83b Very basic Reader test 8 years ago
  Ruben Verweij d2255ee123 Last test of LabelMap 8 years ago
  Ruben Verweij 19c5db83af Test the LabelMap 8 years ago
  Ruben Verweij cb7cb05f74 Add test for Parser 8 years ago
  Ruben Verweij eb12a4cfd4 Add ArtificialND2 class to help in testing nd2 file reading and parsing 8 years ago
  Ruben Verweij 3ece8689bf Remove functional test for now, cannot store large nd2 files on github 8 years ago
  Ruben Verweij e07e29d688 Remove test data (until I find a solution to store them on github) 8 years ago
  Ruben Verweij e4550bce79 Update tests 8 years ago
  Ruben Verweij 6d1fd6d243 Provide backwards compatibility with old 2.1.3 version 8 years ago
  Ruben Verweij 0a944682e0 Fix path to test files 8 years ago
  Ruben Verweij bd10811aee Add unit tests for opening files and axis sizes 8 years ago
  Ruben Verweij 1827fffbd8 Add test for raw metadata 8 years ago
  Ruben Verweij 7761dabac2 Test date parsing 8 years ago
  Ruben Verweij cb2c06f9a5 Complete refactor 8 years ago
  Ruben Verweij d19a9c305b Refactor, add metadata to Frame objects, support PIMS open function 8 years ago
  Jim Rybarski 18e1add3c8 revert versions to the way they were since it broke publishing, added unit test to ensure they're in sync 9 years ago
  Jim Rybarski cd4feea3a6 version number is now set in exactly one place 9 years ago
  Jim Rybarski 47966b75dd resolves #129: renamed filter() to select() 9 years ago
  jim 7c0c8be065 resolves #119: removed some commented-out code and an unused import 9 years ago
  Jim Rybarski 6b859bd7ba updated docs, minor bug fixes, added unit tests 9 years ago
  Jim Rybarski dcdfe161d0 resolves #84: tests run 9 years ago
  jim 949d0612d4 #66 began enormous refactor to support multiple versions of ND2s in an elegant way 9 years ago
  jim c16dccd13a #42 tests for calculate_z_level 9 years ago
  jim 8ae2bf6d06 #42 added simple calculate_channel test 9 years ago
  jim 047af59a1a #42 many passing tests for calculate_channel 9 years ago
  jim 2b62ed4d2d #42 many passing tests for calculate_field_of_view 9 years ago
  jim 07e2297aaf #42 fixed dockerfile and makefile, got one passing test 9 years ago
  jim ae09b688b2 #42 refactored and tidied up a bit, created test files 9 years ago
  jim e995f4b6f4 resolves #16 removed scikit image reference, deleted obsolete files 10 years ago
  Jim Rybarski 872255c61c sorta built new parser 10 years ago