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Refactor

feature/load_slices
Ruben Verweij 6 years ago
parent
commit
c57aff43d7
1 changed files with 54 additions and 50 deletions
  1. +54
    -50
      nd2reader/artificial.py

+ 54
- 50
nd2reader/artificial.py View File

@ -97,6 +97,58 @@ class ArtificialND2(object):
return locations, data return locations, data
@staticmethod
def _get_labels():
return ['image_attributes',
'image_text_info',
'image_metadata',
'image_metadata_sequence',
'image_calibration',
'x_data',
'y_data',
'z_data',
'roi_metadata',
'pfs_status',
'pfs_offset',
'guid',
'description',
'camera_exposure_time',
'camera_temp',
'acquisition_times',
'acquisition_times_2',
'acquisition_frames',
'lut_data',
'grabber_settings',
'custom_data',
'app_info',
'image_frame_0']
@staticmethod
def _get_file_labels():
return ["ImageAttributesLV!",
"ImageTextInfoLV!",
"ImageMetadataLV!",
"ImageMetadataSeqLV|0!",
"ImageCalibrationLV|0!",
"CustomData|X!",
"CustomData|Y!",
"CustomData|Z!",
"CustomData|RoiMetadata_v1!",
"CustomData|PFS_STATUS!",
"CustomData|PFS_OFFSET!",
"CustomData|GUIDStore!",
"CustomData|CustomDescriptionV1_0!",
"CustomData|Camera_ExposureTime1!",
"CustomData|CameraTemp1!",
"CustomData|AcqTimesCache!",
"CustomData|AcqTimes2Cache!",
"CustomData|AcqFramesCache!",
"CustomDataVar|LUTDataV1_0!",
"CustomDataVar|GrabberCameraSettingsV1_0!",
"CustomDataVar|CustomDataV2_0!",
"CustomDataVar|AppInfo_V1_0!",
"ImageDataSeq|0!"]
def create_label_map_bytes(self): def create_label_map_bytes(self):
"""Construct a binary label map """Construct a binary label map
@ -105,56 +157,8 @@ class ArtificialND2(object):
""" """
raw_text = six.b('') raw_text = six.b('')
labels = [
'image_attributes',
'image_text_info',
'image_metadata',
'image_metadata_sequence',
'image_calibration',
'x_data',
'y_data',
'z_data',
'roi_metadata',
'pfs_status',
'pfs_offset',
'guid',
'description',
'camera_exposure_time',
'camera_temp',
'acquisition_times',
'acquisition_times_2',
'acquisition_frames',
'lut_data',
'grabber_settings',
'custom_data',
'app_info',
'image_frame_0'
]
file_labels = [
"ImageAttributesLV!",
"ImageTextInfoLV!",
"ImageMetadataLV!",
"ImageMetadataSeqLV|0!",
"ImageCalibrationLV|0!",
"CustomData|X!",
"CustomData|Y!",
"CustomData|Z!",
"CustomData|RoiMetadata_v1!",
"CustomData|PFS_STATUS!",
"CustomData|PFS_OFFSET!",
"CustomData|GUIDStore!",
"CustomData|CustomDescriptionV1_0!",
"CustomData|Camera_ExposureTime1!",
"CustomData|CameraTemp1!",
"CustomData|AcqTimesCache!",
"CustomData|AcqTimes2Cache!",
"CustomData|AcqFramesCache!",
"CustomDataVar|LUTDataV1_0!",
"CustomDataVar|GrabberCameraSettingsV1_0!",
"CustomDataVar|CustomDataV2_0!",
"CustomDataVar|AppInfo_V1_0!",
"ImageDataSeq|0!"
]
labels = self._get_labels()
file_labels = self._get_file_labels()
file_data, file_data_dict = self._get_file_data(labels) file_data, file_data_dict = self._get_file_data(labels)


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