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zolfa-nd2reader
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resolves
#117
. The XML-formatted strings in a few raw_metadata are now parsed into OrderedDicts. This isn't exposed to the user but if we want to add any of the data it will be more convenient for contributors to examine the contents of the data
feature/load_slices
Jim Rybarski
9 years ago
parent
c697efb3fd
commit
aedfa921a5
2 changed files
with
7 additions
and
5 deletions
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+5
-4
nd2reader/parser/v3.py
+2
-1
setup.py
+ 5
- 4
nd2reader/parser/v3.py
View File
@ -9,6 +9,7 @@ from nd2reader.common.v3 import read_chunk, read_array, read_metadata
import
re
import
six
import
struct
import
xmltodict
def
ignore_missing
(
func
)
:
@ -83,22 +84,22 @@ class V3RawMetadata(object):
@property
@ignore_missing
def
lut_data
(
self
)
:
return
read_chunk
(
self
.
_fh
,
self
.
_label_map
.
lut_data
)
return
xmltodict
.
parse
(
read_chunk
(
self
.
_fh
,
self
.
_label_map
.
lut_data
)
)
@property
@ignore_missing
def
grabber_settings
(
self
)
:
return
read_chunk
(
self
.
_fh
,
self
.
_label_map
.
grabber_settings
)
return
xmltodict
.
parse
(
read_chunk
(
self
.
_fh
,
self
.
_label_map
.
grabber_settings
)
)
@property
@ignore_missing
def
custom_data
(
self
)
:
return
read_chunk
(
self
.
_fh
,
self
.
_label_map
.
custom_data
)
return
xmltodict
.
parse
(
read_chunk
(
self
.
_fh
,
self
.
_label_map
.
custom_data
)
)
@property
@ignore_missing
def
app_info
(
self
)
:
return
read_chunk
(
self
.
_fh
,
self
.
_label_map
.
app_info
)
return
xmltodict
.
parse
(
read_chunk
(
self
.
_fh
,
self
.
_label_map
.
app_info
)
)
@property
@ignore_missing
+ 2
- 1
setup.py
View File
@ -7,7 +7,8 @@ setup(
packages
=
[
'
nd2reader
'
,
'
nd2reader.model
'
,
'
nd2reader.driver
'
,
'
nd2reader.parser
'
,
'
nd2reader.common
'
]
,
install_requires
=
[
'
numpy>=1.6.2, <2.0
'
,
'
six>=1.4, <2.0
'
'
six>=1.4, <2.0
'
,
'
xmltodict>=0.9.2, <1.0
'
]
,
version
=
VERSION
,
description
=
'
A tool for reading ND2 files produced by NIS Elements
'
,
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