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Remove functional test for now, cannot store large nd2 files on github

feature/load_slices
Ruben Verweij 7 years ago
parent
commit
3ece8689bf
2 changed files with 0 additions and 83 deletions
  1. +0
    -44
      tests/test_legacy.py
  2. +0
    -39
      tests/test_reader.py

+ 0
- 44
tests/test_legacy.py View File

@ -1,44 +0,0 @@
"""
Unit test for backwards compatibility.
"""
import unittest
from os import path
from nd2reader.legacy import Nd2
class TestReader(unittest.TestCase):
def setUp(self):
dir_path = path.dirname(path.realpath(__file__))
self.files = [
path.join(dir_path, 'test_data/data001.nd2'),
path.join(dir_path, 'test_data/data002.nd2')
]
def test_sizes_data_001(self):
with Nd2(self.files[0]) as reader:
self.assertEqual(reader.width, 128)
self.assertEqual(reader.height, 128)
self.assertEqual(len(reader.frames), 982)
self.assertEqual(len(reader.channels), 1)
self.assertEqual(len(reader.z_levels), 1)
def test_frame_size_data_001(self):
with Nd2(self.files[0]) as reader:
frame = reader[13]
self.assertEqual(frame.shape[0], 128)
self.assertEqual(frame.shape[1], 128)
def test_sizes_data_002(self):
with Nd2(self.files[1]) as reader:
self.assertEqual(reader.width, 512)
self.assertEqual(reader.height, 256)
self.assertEqual(len(reader.frames), 78)
self.assertEqual(len(reader.channels), 1)
self.assertEqual(len(reader.z_levels), 1)
def test_frame_size_data_002(self):
with Nd2(self.files[1]) as reader:
frame = reader[13]
self.assertEqual(frame.shape[1], 512)
self.assertEqual(frame.shape[0], 256)

+ 0
- 39
tests/test_reader.py View File

@ -1,47 +1,8 @@
import unittest
from os import path
from nd2reader.reader import ND2Reader
class TestReader(unittest.TestCase):
def setUp(self):
dir_path = path.dirname(path.realpath(__file__))
self.files = [
path.join(dir_path, 'test_data/data001.nd2'),
path.join(dir_path, 'test_data/data002.nd2')
]
def test_extension(self):
self.assertTrue('nd2' in ND2Reader.class_exts())
def test_sizes_data_001(self):
with ND2Reader(self.files[0]) as reader:
self.assertEqual(reader.sizes['x'], 128)
self.assertEqual(reader.sizes['y'], 128)
self.assertEqual(reader.sizes['t'], 982)
self.assertEqual(reader.sizes['c'], 1)
self.assertEqual(reader.sizes['z'], 1)
def test_frame_size_data_001(self):
with ND2Reader(self.files[0]) as reader:
frame = reader[13]
self.assertEqual(frame.shape[0], 128)
self.assertEqual(frame.shape[1], 128)
def test_sizes_data_002(self):
with ND2Reader(self.files[1]) as reader:
self.assertEqual(reader.sizes['x'], 512)
self.assertEqual(reader.sizes['y'], 256)
self.assertEqual(reader.sizes['t'], 78)
self.assertEqual(reader.sizes['c'], 1)
self.assertEqual(reader.sizes['z'], 1)
def test_frame_size_data_002(self):
with ND2Reader(self.files[1]) as reader:
frame = reader[13]
self.assertEqual(frame.shape[1], 512)
self.assertEqual(frame.shape[0], 256)

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