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27 lines
732 B
27 lines
732 B
from nd2reader import Nd2
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from pprint import pprint
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import numpy as np
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from skimage import io
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# n = Nd2("/home/jim/Desktop/nd2hacking/test-141111.nd2")
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n = Nd2("/home/jim/Desktop/nd2hacking/YFP-dsRed-GFP-BF.nd2")
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# print("Height: ", n.height)
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# print("Width: ", n.width)
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# for fov in n.fields_of_view:
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# print(fov.number, fov.x, fov.y, fov.z, fov.pfs_offset)
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#
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print(n.timepoint_count)
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print(n.fov_count)
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print(n.channel_count)
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for fov in n.fields_of_view:
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print(fov.number, fov.x, fov.y, fov.z)
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# pprint(len(n.metadata['ImageMetadata']['SLxExperiment']['uLoopPars']['pPeriod']['']))
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# res = n.get_image(6)
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# print(res[0])
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# arr = np.reshape(res[1], (n.height, n.width))
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# io.imshow(arr)
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# io.show()
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# pprint(n.metadata)
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