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[2.1.1] - 2016-02-15
FIXED
Image
objects behave properly when passed to numpy functions. Things like np.mean
will now return scalar values as expected, instead of Image
objects
[2.1.0] - 2016-01-16
ADDED
select
now supports start
and stop
keyword arguments to put bounds on images
[2.0.2] - 2016-01-06
ADDED
Nd2.pixel_microns
gives the width of a pixel
[2.0.1] - 2016-01-06
FIXED
- Channel name parsing issue
select
method works for files with a single frame
[2.0.0] - 2015-12-20
ADDED
select()
method to rapidly iterate over a subset of images matching certain criteria
- We parse metadata relating to the physical camera used to produce the images
- Raw metadata can be accessed conveniently, to allow contributors to find more interesting things to add
- An XML parsing library was added since the raw metadata contains some XML blocks
- The version number is now available in the nd2reader module
- Created a DOI to allow citation of the code
FIXED
- Channel names were not always being parsed properly
REMOVED
- The
ImageGroup
container object
- The
data
attribute on Images. Images now inherit from ndarray, making this redundant
- The
image_sets
iterator
[1.1.4] - 2015-10-27
FIXED
- Implemented missing get_image_by_attributes method
[1.1.3] - 2015-10-16
FIXED
- ND2s with a single image can now be parsed
[1.1.2] - 2015-10-09
ADDED
Image
objects now have a frame_number
attribute.
Nd2
can be used as a context manager
- More unit tests and functional tests
CHANGED
Image
objects now directly subclass Numpy arrays
- Refactored code to permit parsing of different versions of ND2s, which will allow us to add support for NIS Elements 3.x.
DEPRECATED
- The
data
attribute is no longer needed since Image
is now a Numpy array
- The
image_sets
iterator will be removed in the near future. You should implement this yourself
[1.1.1] - 2015-09-02
FIXED
- Images returned by indexing would sometimes be skipped when the file contained multiple channels
CHANGED
- Dockerfile now installs scikit-image to make visual testing possible
[1.1.0] - 2015-06-03
ADDED
- Indexing and slicing of images
- Python 3 support
- Dockerfile support for Python 3.4
- Makefile commands for convenient testing in Docker
- Unit tests
CHANGED
- Switched to setuptools to automatically install missing dependencies
- Made the interface for most metadata public
- Refactored some poorly-named things
[1.0.0] - 2015-05-23
ADDED