""" These tests require that you have a specific ND2 file created by the developer of nd2reader. You will never need to run them unless you're Jim Rybarski. """ from nd2reader import Nd2 from datetime import datetime import unittest class FunctionalTests(unittest.TestCase): def setUp(self): self.nd2 = Nd2("/var/nd2s/FYLM-141111-001.nd2") def tearDown(self): self.nd2.close() def test_shape(self): self.assertEqual(self.nd2.height, 1280) self.assertEqual(self.nd2.width, 800) def test_date(self): self.assertEqual(self.nd2.date, datetime(2014, 11, 11, 15, 59, 19)) def test_length(self): self.assertEqual(len(self.nd2), 30528) def test_frames(self): self.assertEqual(len(self.nd2.frames), 636) def test_fovs(self): self.assertEqual(len(self.nd2.fields_of_view), 8) def test_channels(self): self.assertTupleEqual(tuple(sorted(self.nd2.channels)), ('', 'GFP')) def test_z_levels(self): self.assertTupleEqual(tuple(self.nd2.z_levels), (0, 1, 2)) def test_image(self): image = self.nd2[14] self.assertEqual(image.field_of_view, 2) self.assertEqual(image.frame_number, 0) self.assertAlmostEqual(image.timestamp, 19.0340758) self.assertEqual(image.channel, '') self.assertEqual(image.z_level, 1) self.assertEqual(image.height, self.nd2.height) self.assertEqual(image.width, self.nd2.width) def test_last_image(self): image = self.nd2[30526] self.assertEqual(image.frame_number, 635) def test_bad_image(self): image = self.nd2[13] self.assertIsNone(image)