Commit Graph

  • 3bc9adc Merge pull request #122 from jimrybarski/110-comments by Jim Rybarski 2015-11-01 00:34:09 -0500
  • 09173fc resolves #110: added comments and parameter types to every method with a few minor exceptions where it's super obvious and unimportant what's happening by jim 2015-11-01 00:33:11 -0500
  • cc2a49a #110 added many comments, fixed parameter names where frame_number was incorrectly used in place of index by jim 2015-10-31 23:28:53 -0500
  • 037a87a Merge pull request #121 from jimrybarski/113-remove-deprecated-function by Jim Rybarski 2015-10-31 16:51:33 -0500
  • a102f61 resolves #113: removed `.data` property from images now that they simply behave like numpy arrays by jim 2015-10-31 16:51:13 -0500
  • 0edaee5 Merge pull request #120 from jimrybarski/119-remove-commented-out-code by Jim Rybarski 2015-10-31 16:47:56 -0500
  • 7c0c8be resolves #119: removed some commented-out code and an unused import by jim 2015-10-31 16:47:19 -0500
  • c25798e Merge pull request #118 from jimrybarski/112-remove-image-group by Jim Rybarski 2015-10-31 16:44:15 -0500
  • fd3c67d resolves #112: removed ImageGroup object and image_sets method, as they were deprecated because of their general uselessness by jim 2015-10-31 16:43:40 -0500
  • 07aa008 Merge pull request #116 from jimrybarski/108-better-install-instructions by Jim Rybarski 2015-10-29 19:42:44 -0500
  • de4e348 #108 close spacing is impossible by Jim Rybarski 2015-10-29 19:41:22 -0500
  • fc7e8aa #108 tighter spacing by Jim Rybarski 2015-10-29 19:40:58 -0500
  • 6d3c3db #108 fixes newline by Jim Rybarski 2015-10-29 19:40:11 -0500
  • 9ff5cce resolves #108 by Jim Rybarski 2015-10-29 19:39:09 -0500
  • 6efa9aa #108 changed installation text by Jim Rybarski 2015-10-29 19:32:25 -0500
  • b1bd96d Incremented version to 1.1.4 by Jim Rybarski 2015-10-27 09:19:29 -0500
  • b903b56 Added section header by Jim Rybarski 2015-10-27 09:15:01 -0500
  • 04ea94f Merge remote-tracking branch 'origin/master' by Jim Rybarski 2015-10-27 09:13:49 -0500
  • 1739b11 Made publishing to PyPI easier and made minor README edit by Jim Rybarski 2015-10-27 09:13:40 -0500
  • 4188d66 Merge pull request #107 from jimrybarski/106-bug-open-file-by-attributes by Jim Rybarski 2015-10-27 09:12:42 -0500
  • 90ae090 resolves #106: implemented missing method and added tests by Jim Rybarski 2015-10-27 09:09:49 -0500
  • 1e22e12 Merge pull request #104 from jimrybarski/103-single-image by Jim Rybarski 2015-10-16 05:10:54 -0500
  • 284f677 resolves #103: ND2s with a single image could not be parsed properly as they do not contain any dimension data, so when absent we can assume a single frame exists by Jim Rybarski 2015-10-16 05:10:18 -0500
  • eb02123 Merge pull request #102 from jimrybarski/101-dont-require-date by Jim Rybarski 2015-10-14 06:51:56 -0500
  • 2e6611b #101: Shows the text "Created:" even if there is no creation date by jim 2015-10-12 14:53:54 -0500
  • c3a3cba resolves #101: No longer assumes a date will always be present in the metadata and falls back by displayed "Unknown" in the Nd2 repr by jim 2015-10-12 14:36:07 -0500
  • 2792663 fixed minor testing issues by Jim Rybarski 2015-10-11 14:18:27 -0500
  • 7eb24c1 fixed installer by Jim Rybarski 2015-10-11 14:09:48 -0500
  • d84f694 Added functional tests for iteration by Jim Rybarski 2015-10-11 14:03:44 -0500
  • 70467b9 Added functional tests by Jim Rybarski 2015-10-11 13:59:25 -0500
  • fa82f54 Merge remote-tracking branch 'origin/master' by Jim Rybarski 2015-10-11 13:27:52 -0500
  • 6b859bd updated docs, minor bug fixes, added unit tests by Jim Rybarski 2015-10-11 13:27:17 -0500
  • 87e102d Merge pull request #99 from jimrybarski/84-tests by Jim Rybarski 2015-10-09 23:29:02 -0500
  • 3cc7e03 Merge pull request #98 from jimrybarski/96-context-manager by Jim Rybarski 2015-10-09 23:28:28 -0500
  • dcdfe16 resolves #84: tests run by Jim Rybarski 2015-10-09 23:28:13 -0500
  • 9a86f0c fixed markdown by Jim Rybarski 2015-10-09 23:02:34 -0500
  • 9d8cfd8 updated README by Jim Rybarski 2015-10-09 22:58:35 -0500
  • 9633101 fixed merge conflict and docs by Jim Rybarski 2015-10-09 22:46:37 -0500
  • d49c5f0 #96: documentation changes by Jim Rybarski 2015-10-09 22:31:09 -0500
  • 07cae9d Merge pull request #97 from jimrybarski/96-context-manager by Jim Rybarski 2015-10-09 22:20:06 -0500
  • a9ccdb1 resolves #96: added context manager by Jim Rybarski 2015-10-09 22:18:12 -0500
  • 2b2ad95 fixed syntax errors by Jim Rybarski 2015-10-09 21:57:29 -0500
  • 02f97b1 updated version by Jim Rybarski 2015-10-09 21:28:06 -0500
  • ac91d38 cleaned up a bit by Jim Rybarski 2015-10-09 21:26:08 -0500
  • 49f717b Merge pull request #94 from jimrybarski/88-fix-dockerfile by Jim Rybarski 2015-10-09 19:34:03 -0500
  • 810b7ca resolves #88 by jim 2015-10-09 19:33:32 -0500
  • 438bd32 Merge pull request #93 from jimrybarski/90-attribute-error by Jim Rybarski 2015-10-09 19:21:14 -0500
  • e55029c resolves #90 by jim 2015-10-09 19:20:35 -0500
  • ad947f2 Merge pull request #92 from jimrybarski/91-deprecation by Jim Rybarski 2015-10-09 19:08:30 -0500
  • 70e7f7a added data attribute back with deprecation warning by jim 2015-10-09 19:08:13 -0500
  • 68599ac Merge pull request #89 from jimrybarski/87-update-docs-and-version by Jim Rybarski 2015-10-09 19:04:17 -0500
  • d213ff6 reverted to 1.1.2 by jim 2015-10-09 19:03:21 -0500
  • c9b6bc2 resolves #87 by jim 2015-10-09 19:00:44 -0500
  • f6e3370 Nicer highlighting by jim 2015-10-09 18:41:36 -0500
  • 6fe0cc4 Updated changelog by jim 2015-10-09 18:40:47 -0500
  • 396d7f7 Merge pull request #86 from jimrybarski/66-drivers by Jim Rybarski 2015-10-09 18:24:55 -0500
  • 89d7803 #66 resolves v3 driver refactor by jim 2015-10-09 17:45:33 -0500
  • 4ec5418 #66 fixed import problems by jim 2015-10-04 16:03:35 -0500
  • 12512a5 #66 lol by jim 2015-10-04 15:48:45 -0500
  • 45c148a #66 even more refactoring by jim 2015-09-27 19:50:16 -0500
  • 544fd97 #66 more refactoring by jim 2015-09-26 17:49:57 -0500
  • 177530d #66 refactored init by jim 2015-09-24 18:45:49 -0500
  • c096653 #66 interface refactoring is complete except for comments by jim 2015-09-20 18:45:03 -0500
  • 949d061 #66 began enormous refactor to support multiple versions of ND2s in an elegant way by jim 2015-09-18 21:12:08 -0500
  • a1a8f34 Merge pull request #82 from jimrybarski/81-get-time-index by Jim Rybarski 2015-09-17 15:34:22 -0500
  • 55a3222 resolves #81: images now include the frame number (formerly called the time index). This tells you what order a particular image appeared in its field of view, which is useful when you're considering fields of view as independent regions of interest. Also fixed a bug where the number of image cycles (which should be renamed to "frames") was incorrect for some nd2s. by jim 2015-09-17 15:32:44 -0500
  • 5f734a6 incremented version by jim 2015-09-02 11:00:25 -0500
  • 15b4761 updated changelog for 1.1.1 by jim 2015-09-02 10:56:59 -0500
  • 6d64a7c Merge pull request #80 from jimrybarski/dev by Jim Rybarski 2015-08-28 18:58:22 -0500
  • 9b0b162 Merge pull request #79 from jimrybarski/68-getitem-bug by Jim Rybarski 2015-08-28 18:57:15 -0500
  • 86d2924 resolves #68: indexing was not returning the correct image and skipped frame entirely when there were multiple channels by jim 2015-08-28 18:56:37 -0500
  • 3b18c62 Merge pull request #78 from jimrybarski/77-handle-missing-attributes by Jim Rybarski 2015-08-27 16:46:31 -0500
  • 74dc101 resolves #77: fixes bug where an nd2 with a single cycle or z-level wouldn't work by jim 2015-08-27 16:45:47 -0500
  • 356897b Merge pull request #76 from jimrybarski/73-new-dockerfile by Jim Rybarski 2015-08-26 05:29:26 -0500
  • b63e745 removed redundancy by Jim Rybarski 2015-08-26 05:28:38 -0500
  • 3ff1f4b Merge branches '73-new-dockerfile' and 'dev' of https://github.com/jimrybarski/nd2reader into 73-new-dockerfile by Jim Rybarski 2015-08-26 05:27:51 -0500
  • e75729e fixed dockerfile error by jim 2015-08-25 19:56:13 -0500
  • 46d8ccd added build files to dockerignore by jim 2015-08-25 18:26:56 -0500
  • ac94f37 resolves #73: it's now much easier to do functional testing via docker by Jim Rybarski 2015-08-24 23:17:47 -0500
  • a0b57ec Merge pull request #75 from jimrybarski/69-dockerignore by Jim Rybarski 2015-08-24 21:35:34 -0500
  • d5dc3e3 Merge branch 'dev' into 69-dockerignore by Jim Rybarski 2015-08-24 21:34:21 -0500
  • 1083ff6 resolves #69: Added docker ignore file by Jim Rybarski 2015-08-24 21:32:55 -0500
  • fa477b7 Merge remote-tracking branch 'origin/master' by Jim Rybarski 2015-08-21 23:05:31 -0500
  • fc91ae1 made functional testing easier by Jim Rybarski 2015-08-21 23:05:15 -0500
  • 46cc073 Merge pull request #72 from jimrybarski/71-better-makefile by Jim Rybarski 2015-08-09 12:14:39 -0500
  • b267d76 resolves #71: minor improvements to Makefile by jim 2015-08-09 12:13:54 -0500
  • da6f753 Merge pull request #65 from jimrybarski/dev by Jim Rybarski 2015-06-10 15:47:40 -0500
  • ab5de06 Merge pull request #64 from jimrybarski/62-document-version by Jim Rybarski 2015-06-10 15:47:24 -0500
  • 8207e78 resolves #62: fixed typo by jim 2015-06-10 15:46:24 -0500
  • ae96bd8 resolves #62: added version of NIS Elements by jim 2015-06-10 15:45:53 -0500
  • de22d09 resolves #62: added version of NIS Elements by jim 2015-06-10 15:45:19 -0500
  • 495139f Update README.md by Jim Rybarski 2015-06-03 23:53:02 -0500
  • 5dd7a82 Update README.md by Jim Rybarski 2015-06-03 23:50:24 -0500
  • d615eea Merge pull request #58 from jimrybarski/dev by Jim Rybarski 2015-06-03 23:48:04 -0500
  • 04d909f Merge pull request #57 from jimrybarski/56-readme-for-v1-1 by Jim Rybarski 2015-06-03 23:47:31 -0500
  • 092a993 #56 fix six version by Jim Rybarski 2015-06-04 04:46:33 +0000
  • 1fc449a #56 clearer README, auto-install dependencies, build numpy from source in Docker by Jim Rybarski 2015-06-04 04:32:49 +0000
  • 49737f6 resolves #56 by Jim Rybarski 2015-06-04 03:11:10 +0000
  • 524ec8d Merge pull request #55 from jimrybarski/54-feature-handle-index-error by Jim Rybarski 2015-06-03 16:26:14 -0500
  • 18bb3f5 resolves #54: raises Index error when you go out of bounds by jim 2015-06-03 14:58:42 -0500