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53 Commits (e6471f5a1fdc65a088e676f8dacb0af6850690ba)

Author SHA1 Message Date
  Jim Rybarski e6471f5a1f #2 finished comments and cleanup of image and image set 10 years ago
  jim ffb3f43f7f #2 added reprs 10 years ago
  jim 2861d551cb #2 moved count methods to parser and fixed subtle bug in method that filtered out gap images 10 years ago
  Jim Rybarski 98391dc3c0 refactored the way images are validated 10 years ago
  Jim Rybarski 0dcb18ce00 changed log level 10 years ago
  Jim Rybarski a8a0d2a083 added repr 10 years ago
  Jim Rybarski 50a6de765b removed test lines 10 years ago
  Jim Rybarski 3d387a23c1 resolves #4 10 years ago
  Jim Rybarski 99c26b474f added makefile, simplified the Dockerfile 10 years ago
  jim 7b88c9104e fixed typos 10 years ago
  jim bc8afedcf9 resolves #23 - fixed bug due to improperly refactored logic condition 10 years ago
  jim 3c0e4a45f1 resolves #19 - more efficient checking of spacer images 10 years ago
  jim e995f4b6f4 resolves #16 removed scikit image reference, deleted obsolete files 10 years ago
  Jim Rybarski 9aadde5739 deleted unused method 10 years ago
  Jim Rybarski d06153fa0d much refactor. very change 10 years ago
  jim 46b1cdb933 #11 eliminated the messy parts of the parser, mostly 10 years ago
  jim 5930c63e51 #11 made parser section more readable 10 years ago
  Jim Rybarski de8915fd6b simplified even more 10 years ago
  Jim Rybarski 26ff38d039 created dockerfile 10 years ago
  Jim Rybarski c2cf7958e3 added requirements file 10 years ago
  jim 7fcf2a5740 #11 - partial refactor 10 years ago
  jim b5a84b8059 resolves #5: removed two unnecessary array typecasting operations 10 years ago
  jim c7cc838663 fixed absolute start and redid logging 10 years ago
  jim 719fe46f86 extract absolute start time of acquisition 10 years ago
  jim 33a604b4e3 added field of view to image properties 10 years ago
  jim f4c379f685 added channel name convenience method 10 years ago
  Jim Rybarski b7bc954248 Fixed bug where ND2s having only one channel couldn't be opened 10 years ago
  jim 5ef69bca41 resolves #1 hopefully 10 years ago
  Jim Rybarski 01783026f8 force three zoom levels 10 years ago
  jim 4a0a2c57c1 removed logs 10 years ago
  jim e7e2682949 added some properties to Image 10 years ago
  jim d44968ade6 fixed error where non-deleted fields of view woudn't work 10 years ago
  jim 4c894fb21f refactored a bit 10 years ago
  Jim Rybarski 0f836acb26 cleaned up a bit 10 years ago
  jim 0bd231086b fixed indicies - I think they might vary depending on file so this could cause problems 10 years ago
  jim 19b5ae5221 made some attributes public 10 years ago
  Jim Rybarski 872255c61c sorta built new parser 10 years ago
  jim b4878e28dc made a test model just to figure out how to refactor things 10 years ago
  jim b0fb161355 added public access to field of view count 10 years ago
  jim 57940efae0 got image set iteration working 10 years ago
  jim 4e23aa8f69 image validity test, iterator for all images 10 years ago
  jim 31e53aae9f figured out timepoint counts, updated license 10 years ago
  jim 9aed3cb623 refactored a bit 10 years ago
  jim 3b53a74f65 don't show cropped channels 10 years ago
  jim bf35675022 solved missing fields of view issue 10 years ago
  jim 14d916bc96 really got images now, code so shitty tho 10 years ago
  jim 2e9b558b15 got images sorta working again 10 years ago
  Jim Rybarski d0401fd8e4 identified some metadata to extract 10 years ago
  Jim Rybarski 5fd09ca2bd reads chunks 10 years ago
  Jim Rybarski b619d35ce4 gets chunk labels and pointers 10 years ago