testtest

Commit Graph

Author	SHA1	Message	Date
Zolfa	bfbd78bbe2	added x coordiantes and rotation matrix readout	3 years ago
Zolfa	cd06fd90ff	Minor changes for dev branched version release	3 years ago
Zolfa	831a16983a	Add functions to read only rectangular regions.	4 years ago
Gabriele Girelli	11badb3ee5	Fixed missing filename path.	4 years ago
Gabriele Girelli	65731c9beb	Update stitched.py	4 years ago
Gabriele Girelli	71ddf599bb	Fixed func def	4 years ago
Gabriele Girelli	a27ce7745c	Refactored.	4 years ago
Gabriele Girelli	99e5d507fb	Using numpy assets when possible, and formatted with black	4 years ago
Gabriele Girelli	fbf2fc7271	Switched from warning to raising exception and improved message	4 years ago
Gabriele Girelli	1e0c029283	Improved assert and warning messages	4 years ago
Gabriele Girelli	a5faf7663a	Fixed new init method	4 years ago
Gabriele Girelli	4f11f3f4d0	Allowed for fh to be either str or IO, and formatted with black.	4 years ago
Gabriele Girelli	2e83d26544	Changed structure to check/remove method pair	4 years ago
Gabriele Girelli	237bea49eb	Allowing case of multiple unwanted bytes per step	4 years ago
Gabriele Girelli	5bf56afaec	Complexity	4 years ago
Gabriele Girelli	16b23c2458	Update parser.py	4 years ago
Gabriele Girelli	42a6bd45e4	Complexity	4 years ago
Gabriele Girelli	031856ac8f	Fixed complexity	4 years ago
Gabriele Girelli	20d7faa6dc	Regenerated Reader	4 years ago
Gabriele Girelli	9d40a12f96	Fixed complexity	4 years ago
Gabriele Girelli	1ed1f0bb24	Removed empty bytes at channel subchunk ends Checks if the chunk data size does not match the expected, based on image axes size. Verifies that all unwanted bytes are zero-bytes and removes them. Two triggered warnings: one for unwanted bytes and one for bytes removed (more of an INFO though).	4 years ago
Gabriele Girelli	59a99a8f0e	Update reader.py	4 years ago
Ruben Verweij	10e080da78	Fix issue #34	5 years ago
Ruben Verweij	e309631c84	Use timesteps as fallback to NDExperiment loops to determine total file duration, and thus framerate	5 years ago
Ruben Verweij	1b8b835332	Fix error in loop handling	5 years ago
Gabriele Girelli	90a4ffc747	f-strings not supported by Python3.6-	5 years ago
Ruben Verweij	94e028909c	Fix typo in z-level check	5 years ago
Ulugbek Abdullaev	9059a15781	add a check that filename passed to nd2reader has an extension .nd2 because the current implementation raises InvalidVersionError if the passed file is non-nd2 type, which is misleading add an exception InvalidFileType add a test for the new behavior of ND2Reader constructor	5 years ago
Gabriele Girelli	fe2bb5932c	Removed self.__class__ from super() call	5 years ago
Ruben Verweij	06c9c20ce1	Version 3.2.3 due to build error of new version number storage system	5 years ago
Ruben Verweij	4a5965a457	New version 3.2.2	5 years ago
Gabriele Girelli	399b42e383	Update raw_metadata.py	5 years ago
Gabriele Girelli	898dd09e14	Update raw_metadata.py Changed isinstance to is. Fixed condition triggering warning.	5 years ago
Gabriele Girelli	bec47a5fb6	Update raw_metadata.py	5 years ago
Gabriele Girelli	df1cf09e36	Using Z slice coordinates from Z-data instead of Z-levels and show warning in case of mismatch	5 years ago
Ruben Verweij	4d9bc03c44	Resolve issue #24	5 years ago
Ruben Verweij	31f80554b1	Issue #24 : only return a Frame when bundle_axes is only y,x	5 years ago
Ruben Verweij	322969bceb	Update get_frame_vczyx function based on feedback in issue #24	5 years ago
Ruben Verweij	8e0a642ed2	Fixes issue #25 , adds unit tests and release 3.2.1	5 years ago
Ruben Verweij	38a0def075	Fixes issue 25	5 years ago
Ruben Verweij	54cce884c1	Fix issue with bundle_axes and get_frame	5 years ago
Ruben Verweij	52fc791eb7	Update version 3.2.0	5 years ago
unknown	17881d60f1	More informative warning if gap frames encountered and filled with np.nan	5 years ago
unknown	43dbc61412	Handle gap frames with np.nan-filled array and issue warning about it.	5 years ago
unknown	da185df9cd	removed NoImageError call, class def, and import references since now redundant	5 years ago
Ruben Verweij	295ccf5e5b	Add acquisition times to parser	5 years ago
Ruben Verweij	38d6e8ce5a	Fixes issue #11	5 years ago
Ruben Verweij	6dd7f9dfe2	Fixes issue #16	5 years ago
Ruben Verweij	3e4845b309	Fallback function for old get_frame_2D function	5 years ago
unknown	1fed0c1fb1	fix to allow reading of ND2-files with missing frames, due to e.g. skipping z-positions in one channel of a multichannel image; based on most recent commit of master	5 years ago

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275 Commits (bfbd78bbe25e28b15621e6f67311de9c25f11afa)