Jim Rybarski
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a8a0d2a083
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added repr
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10 years ago |
Jim Rybarski
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50a6de765b
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removed test lines
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10 years ago |
Jim Rybarski
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3d387a23c1
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resolves #4
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10 years ago |
Jim Rybarski
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99c26b474f
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added makefile, simplified the Dockerfile
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10 years ago |
jim
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7b88c9104e
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fixed typos
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10 years ago |
jim
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bc8afedcf9
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resolves #23 - fixed bug due to improperly refactored logic condition
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10 years ago |
jim
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3c0e4a45f1
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resolves #19 - more efficient checking of spacer images
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10 years ago |
jim
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e995f4b6f4
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resolves #16 removed scikit image reference, deleted obsolete files
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10 years ago |
Jim Rybarski
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9aadde5739
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deleted unused method
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10 years ago |
Jim Rybarski
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d06153fa0d
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much refactor. very change
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10 years ago |
jim
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46b1cdb933
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#11 eliminated the messy parts of the parser, mostly
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10 years ago |
jim
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5930c63e51
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#11 made parser section more readable
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10 years ago |
Jim Rybarski
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de8915fd6b
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simplified even more
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10 years ago |
Jim Rybarski
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26ff38d039
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created dockerfile
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10 years ago |
Jim Rybarski
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c2cf7958e3
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added requirements file
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10 years ago |
jim
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7fcf2a5740
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#11 - partial refactor
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10 years ago |
jim
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b5a84b8059
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resolves #5: removed two unnecessary array typecasting operations
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10 years ago |
jim
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c7cc838663
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fixed absolute start and redid logging
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10 years ago |
jim
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719fe46f86
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extract absolute start time of acquisition
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10 years ago |
jim
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33a604b4e3
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added field of view to image properties
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10 years ago |
jim
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f4c379f685
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added channel name convenience method
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10 years ago |
Jim Rybarski
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b7bc954248
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Fixed bug where ND2s having only one channel couldn't be opened
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10 years ago |
jim
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5ef69bca41
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resolves #1 hopefully
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10 years ago |
Jim Rybarski
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01783026f8
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force three zoom levels
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10 years ago |
jim
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4a0a2c57c1
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removed logs
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10 years ago |
jim
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e7e2682949
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added some properties to Image
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10 years ago |
jim
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d44968ade6
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fixed error where non-deleted fields of view woudn't work
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10 years ago |
jim
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4c894fb21f
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refactored a bit
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10 years ago |
Jim Rybarski
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0f836acb26
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cleaned up a bit
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10 years ago |
jim
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0bd231086b
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fixed indicies - I think they might vary depending on file so this could cause problems
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10 years ago |
jim
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19b5ae5221
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made some attributes public
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10 years ago |
Jim Rybarski
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872255c61c
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sorta built new parser
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10 years ago |
jim
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b4878e28dc
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made a test model just to figure out how to refactor things
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10 years ago |
jim
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b0fb161355
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added public access to field of view count
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10 years ago |
jim
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57940efae0
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got image set iteration working
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10 years ago |
jim
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4e23aa8f69
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image validity test, iterator for all images
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10 years ago |
jim
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31e53aae9f
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figured out timepoint counts, updated license
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10 years ago |
jim
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9aed3cb623
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refactored a bit
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10 years ago |
jim
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3b53a74f65
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don't show cropped channels
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10 years ago |
jim
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bf35675022
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solved missing fields of view issue
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10 years ago |
jim
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14d916bc96
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really got images now, code so shitty tho
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10 years ago |
jim
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2e9b558b15
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got images sorta working again
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10 years ago |
Jim Rybarski
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d0401fd8e4
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identified some metadata to extract
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10 years ago |
Jim Rybarski
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5fd09ca2bd
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reads chunks
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10 years ago |
Jim Rybarski
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b619d35ce4
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gets chunk labels and pointers
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10 years ago |
Jim Rybarski
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8b01f7ff65
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reads the chunk map location
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10 years ago |