Ulugbek Abdullaev
|
9059a15781
|
add a check that filename passed to nd2reader has an extension .nd2 because the current implementation raises InvalidVersionError if the passed file is non-nd2 type, which is misleading
add an exception InvalidFileType
add a test for the new behavior of ND2Reader constructor
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5 years ago |
Gabriele Girelli
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fe2bb5932c
|
Removed self.__class__ from super() call
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5 years ago |
Ruben Verweij
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06c9c20ce1
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Version 3.2.3 due to build error of new version number storage system
|
5 years ago |
Ruben Verweij
|
4a5965a457
|
New version 3.2.2
|
5 years ago |
Gabriele Girelli
|
399b42e383
|
Update raw_metadata.py
|
5 years ago |
Gabriele Girelli
|
898dd09e14
|
Update raw_metadata.py
Changed isinstance to is.
Fixed condition triggering warning.
|
5 years ago |
Gabriele Girelli
|
bec47a5fb6
|
Update raw_metadata.py
|
5 years ago |
Gabriele Girelli
|
df1cf09e36
|
Using Z slice coordinates from Z-data instead of Z-levels and show warning in case of mismatch
|
5 years ago |
Ruben Verweij
|
4d9bc03c44
|
Resolve issue #24
|
5 years ago |
Ruben Verweij
|
31f80554b1
|
Issue #24: only return a Frame when bundle_axes is only y,x
|
5 years ago |
Ruben Verweij
|
322969bceb
|
Update get_frame_vczyx function based on feedback in issue #24
|
5 years ago |
Ruben Verweij
|
8e0a642ed2
|
Fixes issue #25, adds unit tests and release 3.2.1
|
5 years ago |
Ruben Verweij
|
38a0def075
|
Fixes issue 25
|
5 years ago |
Ruben Verweij
|
54cce884c1
|
Fix issue with bundle_axes and get_frame
|
5 years ago |
Ruben Verweij
|
52fc791eb7
|
Update version 3.2.0
|
5 years ago |
unknown
|
17881d60f1
|
More informative warning if gap frames encountered and filled with np.nan
|
5 years ago |
unknown
|
43dbc61412
|
Handle gap frames with np.nan-filled array and issue warning about it.
|
5 years ago |
unknown
|
da185df9cd
|
removed NoImageError call, class def, and import references since now redundant
|
5 years ago |
Ruben Verweij
|
295ccf5e5b
|
Add acquisition times to parser
|
5 years ago |
Ruben Verweij
|
38d6e8ce5a
|
Fixes issue #11
|
5 years ago |
Ruben Verweij
|
6dd7f9dfe2
|
Fixes issue #16
|
5 years ago |
Ruben Verweij
|
3e4845b309
|
Fallback function for old get_frame_2D function
|
5 years ago |
unknown
|
1fed0c1fb1
|
fix to allow reading of ND2-files with missing frames, due to e.g. skipping z-positions in one channel of a multichannel image; based on most recent commit of master
|
5 years ago |
Ruben Verweij
|
faa495ecdb
|
Use _register_get_frame functions
|
6 years ago |
Gregor Lichtner
|
016239f1dd
|
added event names
|
6 years ago |
Gregor Lichtner
|
26bdbf36f0
|
fixed behavior when no events are available
|
6 years ago |
Gregor Lichtner
|
4efd9a2ea4
|
added image events to parser
|
6 years ago |
Gregor Lichtner
|
7c64194ca8
|
include only valid loops in experiment metadata
|
6 years ago |
jbf81tb
|
75f19554e4
|
get_frame_2D fix
|
6 years ago |
Ruben Verweij
|
f9665259df
|
Fix fps calculation
|
6 years ago |
Ruben Verweij
|
bc2f5a96f6
|
Version 3.1.0
|
6 years ago |
Ruben Verweij
|
509979a2bc
|
Fix error
|
6 years ago |
Ruben Verweij
|
451b555539
|
Fix formatting error
|
6 years ago |
Ruben Verweij
|
2cd1dd0467
|
Refactor
|
6 years ago |
Ruben Verweij
|
12e3cd628b
|
Refactor
|
6 years ago |
Ruben Verweij
|
4d062e67b8
|
Refactor
|
6 years ago |
Ruben Verweij
|
c1b4b37878
|
Refactor
|
6 years ago |
Ruben Verweij
|
2a807946da
|
Workaround issue #6, fix unit test timesteps
|
6 years ago |
Ruben Verweij
|
93f886e9e9
|
Fix to take into account real acquisition times when calculating framerate instead of the set interval (which is sometimes inaccurate)
|
6 years ago |
Ruben Verweij
|
dd87a37103
|
3.0.9
|
7 years ago |
Ruben Verweij
|
2ba845142e
|
Fix version number
|
7 years ago |
Ruben Verweij
|
5673262295
|
New release
|
7 years ago |
Ruben Verweij
|
800fe54ecb
|
Version 3.0.7
|
7 years ago |
Ruben Verweij
|
731a05214a
|
Fix #4
|
7 years ago |
Ruben Verweij
|
86bd2eb99d
|
Version 3.0.6: Add FOV support
|
7 years ago |
Ruben Verweij
|
e884071b0b
|
Add additional date formats for parsing raw metadata
|
7 years ago |
Ruben Verweij
|
0af2d2e316
|
Version 3.0.5
|
7 years ago |
Ruben Verweij
|
04e67fc5ec
|
Refactor CQ
|
7 years ago |
Ruben Verweij
|
1587ed863d
|
Test color channels, fix a bug in color channel encoding
|
7 years ago |
Ruben Verweij
|
81b785d1e7
|
Test legacy Nd2, parser, reader fixes
|
7 years ago |