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200 Commits (731a05214acc82ecbaf926552477fa530527259d)

Author SHA1 Message Date
  Ruben Verweij 731a05214a Fix #4 7 years ago
  Ruben Verweij 86bd2eb99d Version 3.0.6: Add FOV support 7 years ago
  Ruben Verweij e884071b0b Add additional date formats for parsing raw metadata 7 years ago
  Ruben Verweij 0af2d2e316 Version 3.0.5 7 years ago
  Ruben Verweij 04e67fc5ec Refactor CQ 7 years ago
  Ruben Verweij 1587ed863d Test color channels, fix a bug in color channel encoding 7 years ago
  Ruben Verweij 81b785d1e7 Test legacy Nd2, parser, reader fixes 7 years ago
  Ruben Verweij c2302092ab Extend unit tests 7 years ago
  Ruben Verweij a0ae292794 Extend unit tests, remove badge 7 years ago
  Ruben Verweij b85a8621e8 Remove unused lines from artificial 7 years ago
  Ruben Verweij 5214180e70 Fix bytes compatibility for Python 2 7 years ago
  Ruben Verweij d943ee80b9 Unit testing: test the correct parsing of image_attributes 7 years ago
  Ruben Verweij 85e15ac86b Add a class priority so this reader will be loaded before the Bioformats reader 7 years ago
  Ruben Verweij 1e90e3a303 Add try/except blocks to make code more robust + fix unit tests 7 years ago
  Ruben Verweij 4acdf0cf55 Extend artificial to also write the label_map + data to file for more extensive unit testing 7 years ago
  Ruben Verweij 8c84fa6c17 Fix imports of pims and release 3.0.4 8 years ago
  Ruben Verweij d743d556ad Fix small bug when uiCount cannot be found 8 years ago
  Ruben Verweij 6a63a6f742 Version 3.0.3 8 years ago
  Ruben Verweij 39eada0948 Add a third method to determine the loop sampling interval 8 years ago
  Ruben Verweij 94e10dbe1f Cache timesteps and add frame rate property 8 years ago
  Ruben Verweij bce39c1acc Always set 't' axis 8 years ago
  Ruben Verweij a228fdbd9a Also get sampling interval when dAvgPeriodDiff is not set 8 years ago
  Ruben Verweij 5f77688aed Only setup certain axes if size > 1 8 years ago
  Ruben Verweij f4ee6b923e Update version 3.0.2 8 years ago
  Ruben Verweij 3b65069ef3 Issue #2: fix calculation of image group number when there is no z-axis 8 years ago
  Ruben Verweij 16288909b9 Issue #2: clean up axes handling, guess a better default axis 8 years ago
  Ruben Verweij b7c60e3a27 Fix issue #2 by following PIMS conventions more closely 8 years ago
  Ruben Verweij 10c2589348 Do not add 'z' to sizes of the reader if there is only one plane, as seems to be the PIMS convention 8 years ago
  Ruben Verweij 93446019ed version 3.0.1: Include LICENSE via MANIFEST.in for conda forge 8 years ago
  Ruben Verweij f88965ce8d Fix the number of frames 8 years ago
  Ruben Verweij 17df7ed8a6 Add more unit test for common + fix possibly endless loop 8 years ago
  Ruben Verweij e5557b0073 Fix creating test file for unit tests 8 years ago
  Ruben Verweij 9d2188aa47 Bug fixes by testing different .nd2 files 8 years ago
  Ruben Verweij 0ba84df3f9 Bump version number to reflect api changes 8 years ago
  Ruben Verweij d4ae515e09 Extend unit tests 8 years ago
  Ruben Verweij a50b446373 Extend unit tests 8 years ago
  Ruben Verweij 2b0600ee09 Extend unit tests 8 years ago
  Ruben Verweij 2c121dc0ff New documentation 8 years ago
  Ruben Verweij aa7e05f1d2 Very basic Reader test 8 years ago
  Ruben Verweij 0a17948b39 Last test of LabelMap 8 years ago
  Ruben Verweij 4183bcc4d5 Code fixes 8 years ago
  Ruben Verweij 7a8733b04e Test the LabelMap 8 years ago
  Ruben Verweij 9696954baf Add test for Parser 8 years ago
  Ruben Verweij 03bfc09922 Add ArtificialND2 class to help in testing nd2 file reading and parsing 8 years ago
  Ruben Verweij c6e5a13a0d Provide backwards compatibility with old 2.1.3 version 8 years ago
  Ruben Verweij b7ff34def5 Cleanup documentation 8 years ago
  Ruben Verweij 480432df50 Improve documentation 8 years ago
  Ruben Verweij 2f2f138f17 docstrings 8 years ago
  Ruben Verweij 60378ad06f Cleanup docstrings to use google python docs 8 years ago
  Ruben Verweij 4841c09eb7 Correctly parse experiment data for NDAqcuisition and add get_timesteps function to reader 8 years ago