Gabriele Girelli
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59a99a8f0e
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Update reader.py
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4 years ago |
Ruben Verweij
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10e080da78
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Fix issue #34
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5 years ago |
Ruben Verweij
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e309631c84
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Use timesteps as fallback to NDExperiment loops to determine total file duration, and thus framerate
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5 years ago |
Ruben Verweij
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1b8b835332
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Fix error in loop handling
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5 years ago |
Gabriele Girelli
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90a4ffc747
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f-strings not supported by Python3.6-
|
5 years ago |
Ruben Verweij
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94e028909c
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Fix typo in z-level check
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5 years ago |
Ulugbek Abdullaev
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9059a15781
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add a check that filename passed to nd2reader has an extension .nd2 because the current implementation raises InvalidVersionError if the passed file is non-nd2 type, which is misleading
add an exception InvalidFileType
add a test for the new behavior of ND2Reader constructor
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5 years ago |
Gabriele Girelli
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fe2bb5932c
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Removed self.__class__ from super() call
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5 years ago |
Ruben Verweij
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06c9c20ce1
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Version 3.2.3 due to build error of new version number storage system
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5 years ago |
Ruben Verweij
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4a5965a457
|
New version 3.2.2
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5 years ago |
Gabriele Girelli
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399b42e383
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Update raw_metadata.py
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5 years ago |
Gabriele Girelli
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898dd09e14
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Update raw_metadata.py
Changed isinstance to is.
Fixed condition triggering warning.
|
5 years ago |
Gabriele Girelli
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bec47a5fb6
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Update raw_metadata.py
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5 years ago |
Gabriele Girelli
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df1cf09e36
|
Using Z slice coordinates from Z-data instead of Z-levels and show warning in case of mismatch
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5 years ago |
Ruben Verweij
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4d9bc03c44
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Resolve issue #24
|
5 years ago |
Ruben Verweij
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31f80554b1
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Issue #24: only return a Frame when bundle_axes is only y,x
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5 years ago |
Ruben Verweij
|
322969bceb
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Update get_frame_vczyx function based on feedback in issue #24
|
5 years ago |
Ruben Verweij
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8e0a642ed2
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Fixes issue #25, adds unit tests and release 3.2.1
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5 years ago |
Ruben Verweij
|
38a0def075
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Fixes issue 25
|
5 years ago |
Ruben Verweij
|
54cce884c1
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Fix issue with bundle_axes and get_frame
|
5 years ago |
Ruben Verweij
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52fc791eb7
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Update version 3.2.0
|
5 years ago |
unknown
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17881d60f1
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More informative warning if gap frames encountered and filled with np.nan
|
5 years ago |
unknown
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43dbc61412
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Handle gap frames with np.nan-filled array and issue warning about it.
|
5 years ago |
unknown
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da185df9cd
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removed NoImageError call, class def, and import references since now redundant
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5 years ago |
Ruben Verweij
|
295ccf5e5b
|
Add acquisition times to parser
|
5 years ago |
Ruben Verweij
|
38d6e8ce5a
|
Fixes issue #11
|
5 years ago |
Ruben Verweij
|
6dd7f9dfe2
|
Fixes issue #16
|
5 years ago |
Ruben Verweij
|
3e4845b309
|
Fallback function for old get_frame_2D function
|
5 years ago |
unknown
|
1fed0c1fb1
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fix to allow reading of ND2-files with missing frames, due to e.g. skipping z-positions in one channel of a multichannel image; based on most recent commit of master
|
5 years ago |
Ruben Verweij
|
faa495ecdb
|
Use _register_get_frame functions
|
6 years ago |
Gregor Lichtner
|
016239f1dd
|
added event names
|
6 years ago |
Gregor Lichtner
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26bdbf36f0
|
fixed behavior when no events are available
|
6 years ago |
Gregor Lichtner
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4efd9a2ea4
|
added image events to parser
|
6 years ago |
Gregor Lichtner
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7c64194ca8
|
include only valid loops in experiment metadata
|
6 years ago |
jbf81tb
|
75f19554e4
|
get_frame_2D fix
|
6 years ago |
Ruben Verweij
|
f9665259df
|
Fix fps calculation
|
6 years ago |
Ruben Verweij
|
bc2f5a96f6
|
Version 3.1.0
|
6 years ago |
Ruben Verweij
|
509979a2bc
|
Fix error
|
6 years ago |
Ruben Verweij
|
451b555539
|
Fix formatting error
|
6 years ago |
Ruben Verweij
|
2cd1dd0467
|
Refactor
|
6 years ago |
Ruben Verweij
|
12e3cd628b
|
Refactor
|
6 years ago |
Ruben Verweij
|
4d062e67b8
|
Refactor
|
6 years ago |
Ruben Verweij
|
c1b4b37878
|
Refactor
|
6 years ago |
Ruben Verweij
|
2a807946da
|
Workaround issue #6, fix unit test timesteps
|
6 years ago |
Ruben Verweij
|
93f886e9e9
|
Fix to take into account real acquisition times when calculating framerate instead of the set interval (which is sometimes inaccurate)
|
6 years ago |
Ruben Verweij
|
dd87a37103
|
3.0.9
|
7 years ago |
Ruben Verweij
|
2ba845142e
|
Fix version number
|
7 years ago |
Ruben Verweij
|
5673262295
|
New release
|
7 years ago |
Ruben Verweij
|
800fe54ecb
|
Version 3.0.7
|
7 years ago |
Ruben Verweij
|
731a05214a
|
Fix #4
|
7 years ago |