Ruben Verweij
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800fe54ecb
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Version 3.0.7
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7 years ago |
Ruben Verweij
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731a05214a
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Fix #4
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7 years ago |
Ruben Verweij
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86bd2eb99d
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Version 3.0.6: Add FOV support
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7 years ago |
Ruben Verweij
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e884071b0b
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Add additional date formats for parsing raw metadata
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7 years ago |
Ruben Verweij
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0af2d2e316
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Version 3.0.5
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7 years ago |
Ruben Verweij
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04e67fc5ec
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Refactor CQ
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7 years ago |
Ruben Verweij
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1587ed863d
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Test color channels, fix a bug in color channel encoding
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7 years ago |
Ruben Verweij
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81b785d1e7
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Test legacy Nd2, parser, reader fixes
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7 years ago |
Ruben Verweij
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c2302092ab
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Extend unit tests
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7 years ago |
Ruben Verweij
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a0ae292794
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Extend unit tests, remove badge
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7 years ago |
Ruben Verweij
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b85a8621e8
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Remove unused lines from artificial
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7 years ago |
Ruben Verweij
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5214180e70
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Fix bytes compatibility for Python 2
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7 years ago |
Ruben Verweij
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d943ee80b9
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Unit testing: test the correct parsing of image_attributes
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7 years ago |
Ruben Verweij
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85e15ac86b
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Add a class priority so this reader will be loaded before the Bioformats reader
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7 years ago |
Ruben Verweij
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1e90e3a303
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Add try/except blocks to make code more robust + fix unit tests
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7 years ago |
Ruben Verweij
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4acdf0cf55
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Extend artificial to also write the label_map + data to file for more extensive unit testing
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7 years ago |
Ruben Verweij
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8c84fa6c17
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Fix imports of pims and release 3.0.4
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8 years ago |
Ruben Verweij
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d743d556ad
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Fix small bug when uiCount cannot be found
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8 years ago |
Ruben Verweij
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6a63a6f742
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Version 3.0.3
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8 years ago |
Ruben Verweij
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39eada0948
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Add a third method to determine the loop sampling interval
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8 years ago |
Ruben Verweij
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94e10dbe1f
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Cache timesteps and add frame rate property
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8 years ago |
Ruben Verweij
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bce39c1acc
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Always set 't' axis
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8 years ago |
Ruben Verweij
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a228fdbd9a
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Also get sampling interval when dAvgPeriodDiff is not set
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8 years ago |
Ruben Verweij
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5f77688aed
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Only setup certain axes if size > 1
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8 years ago |
Ruben Verweij
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f4ee6b923e
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Update version 3.0.2
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8 years ago |
Ruben Verweij
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3b65069ef3
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Issue #2: fix calculation of image group number when there is no z-axis
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8 years ago |
Ruben Verweij
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16288909b9
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Issue #2: clean up axes handling, guess a better default axis
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8 years ago |
Ruben Verweij
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b7c60e3a27
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Fix issue #2 by following PIMS conventions more closely
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8 years ago |
Ruben Verweij
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10c2589348
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Do not add 'z' to sizes of the reader if there is only one plane, as seems to be the PIMS convention
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8 years ago |
Ruben Verweij
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93446019ed
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version 3.0.1: Include LICENSE via MANIFEST.in for conda forge
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8 years ago |
Ruben Verweij
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f88965ce8d
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Fix the number of frames
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8 years ago |
Ruben Verweij
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17df7ed8a6
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Add more unit test for common + fix possibly endless loop
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8 years ago |
Ruben Verweij
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e5557b0073
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Fix creating test file for unit tests
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8 years ago |
Ruben Verweij
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9d2188aa47
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Bug fixes by testing different .nd2 files
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8 years ago |
Ruben Verweij
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0ba84df3f9
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Bump version number to reflect api changes
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8 years ago |
Ruben Verweij
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d4ae515e09
|
Extend unit tests
|
8 years ago |
Ruben Verweij
|
a50b446373
|
Extend unit tests
|
8 years ago |
Ruben Verweij
|
2b0600ee09
|
Extend unit tests
|
8 years ago |
Ruben Verweij
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2c121dc0ff
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New documentation
|
8 years ago |
Ruben Verweij
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aa7e05f1d2
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Very basic Reader test
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8 years ago |
Ruben Verweij
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0a17948b39
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Last test of LabelMap
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8 years ago |
Ruben Verweij
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4183bcc4d5
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Code fixes
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8 years ago |
Ruben Verweij
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7a8733b04e
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Test the LabelMap
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8 years ago |
Ruben Verweij
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9696954baf
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Add test for Parser
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8 years ago |
Ruben Verweij
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03bfc09922
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Add ArtificialND2 class to help in testing nd2 file reading and parsing
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8 years ago |
Ruben Verweij
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c6e5a13a0d
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Provide backwards compatibility with old 2.1.3 version
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8 years ago |
Ruben Verweij
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b7ff34def5
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Cleanup documentation
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8 years ago |
Ruben Verweij
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480432df50
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Improve documentation
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8 years ago |
Ruben Verweij
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2f2f138f17
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docstrings
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8 years ago |
Ruben Verweij
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60378ad06f
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Cleanup docstrings to use google python docs
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8 years ago |