Ruben Verweij
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10e080da78
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Fix issue #34
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5 years ago |
Ulugbek Abdullaev
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9059a15781
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add a check that filename passed to nd2reader has an extension .nd2 because the current implementation raises InvalidVersionError if the passed file is non-nd2 type, which is misleading
add an exception InvalidFileType
add a test for the new behavior of ND2Reader constructor
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5 years ago |
Ruben Verweij
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4d9bc03c44
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Resolve issue #24
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5 years ago |
Ruben Verweij
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0d533bfb96
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Make unit test less specific to accomodate for different versions of struct
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5 years ago |
Ruben Verweij
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8e0a642ed2
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Fixes issue #25, adds unit tests and release 3.2.1
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5 years ago |
Ruben Verweij
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593c976459
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Expand tests
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6 years ago |
Ruben Verweij
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2cd1dd0467
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Refactor
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6 years ago |
Ruben Verweij
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dd87a37103
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3.0.9
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7 years ago |
Ruben Verweij
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f2e6153bf2
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Fix test and update gitignore
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7 years ago |
Ruben Verweij
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731a05214a
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Fix #4
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7 years ago |
Ruben Verweij
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1587ed863d
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Test color channels, fix a bug in color channel encoding
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7 years ago |
Ruben Verweij
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81b785d1e7
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Test legacy Nd2, parser, reader fixes
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7 years ago |
Ruben Verweij
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c2302092ab
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Extend unit tests
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7 years ago |
Ruben Verweij
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a0ae292794
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Extend unit tests, remove badge
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7 years ago |
Ruben Verweij
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5214180e70
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Fix bytes compatibility for Python 2
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7 years ago |
Ruben Verweij
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d943ee80b9
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Unit testing: test the correct parsing of image_attributes
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7 years ago |
Ruben Verweij
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4acdf0cf55
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Extend artificial to also write the label_map + data to file for more extensive unit testing
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7 years ago |
Ruben Verweij
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16288909b9
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Issue #2: clean up axes handling, guess a better default axis
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8 years ago |
Ruben Verweij
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10c2589348
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Do not add 'z' to sizes of the reader if there is only one plane, as seems to be the PIMS convention
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8 years ago |
Ruben Verweij
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93446019ed
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version 3.0.1: Include LICENSE via MANIFEST.in for conda forge
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8 years ago |
Ruben Verweij
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d2a5d96f14
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Add test for raw metadata storage
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8 years ago |
Ruben Verweij
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17df7ed8a6
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Add more unit test for common + fix possibly endless loop
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8 years ago |
Ruben Verweij
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e5557b0073
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Fix creating test file for unit tests
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8 years ago |
Ruben Verweij
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9d2188aa47
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Bug fixes by testing different .nd2 files
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8 years ago |
Ruben Verweij
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a50b446373
|
Extend unit tests
|
8 years ago |
Ruben Verweij
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2b0600ee09
|
Extend unit tests
|
8 years ago |
Ruben Verweij
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aa7e05f1d2
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Very basic Reader test
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8 years ago |
Ruben Verweij
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0a17948b39
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Last test of LabelMap
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8 years ago |
Ruben Verweij
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7a8733b04e
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Test the LabelMap
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8 years ago |
Ruben Verweij
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9696954baf
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Add test for Parser
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8 years ago |
Ruben Verweij
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03bfc09922
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Add ArtificialND2 class to help in testing nd2 file reading and parsing
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8 years ago |
Ruben Verweij
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5974408aa5
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Remove functional test for now, cannot store large nd2 files on github
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8 years ago |
Ruben Verweij
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dc987dbcaa
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Remove test data (until I find a solution to store them on github)
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8 years ago |
Ruben Verweij
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59101e66e4
|
data
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8 years ago |
Ruben Verweij
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c212ced139
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Test files to git large file storage (git LFS)
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8 years ago |
Ruben Verweij
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3620064dfd
|
Update tests
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8 years ago |
Ruben Verweij
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c6e5a13a0d
|
Provide backwards compatibility with old 2.1.3 version
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8 years ago |
Ruben Verweij
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0d3e07e521
|
Fix path to test files
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8 years ago |
Ruben Verweij
|
8f513fde74
|
Add unit tests for opening files and axis sizes
|
8 years ago |
Ruben Verweij
|
1827fffbd8
|
Add test for raw metadata
|
8 years ago |
Ruben Verweij
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7761dabac2
|
Test date parsing
|
8 years ago |
Ruben Verweij
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cb2c06f9a5
|
Complete refactor
- use only one parser for v3 files
- merge some classes
- return metadata as raw metadata and dictionary
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8 years ago |
Ruben Verweij
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d19a9c305b
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Refactor, add metadata to Frame objects, support PIMS open function
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8 years ago |
Jim Rybarski
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18e1add3c8
|
revert versions to the way they were since it broke publishing, added unit test to ensure they're in sync
|
9 years ago |
Jim Rybarski
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cd4feea3a6
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version number is now set in exactly one place
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9 years ago |
Jim Rybarski
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47966b75dd
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resolves #129: renamed filter() to select()
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9 years ago |
jim
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7c0c8be065
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resolves #119: removed some commented-out code and an unused import
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9 years ago |
Jim Rybarski
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6b859bd7ba
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updated docs, minor bug fixes, added unit tests
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9 years ago |
Jim Rybarski
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dcdfe161d0
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resolves #84: tests run
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9 years ago |
jim
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949d0612d4
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#66 began enormous refactor to support multiple versions of ND2s in an elegant way
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9 years ago |