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- import unittest
- from os import path
-
- from nd2reader.reader import ND2Reader
-
-
- class TestReader(unittest.TestCase):
-
- def setUp(self):
- dir_path = path.dirname(path.realpath(__file__))
- self.files = [
- path.join(dir_path, 'test_data/data001.nd2'),
- path.join(dir_path, 'test_data/data002.nd2')
- ]
-
- def test_sizes_data_001(self):
- with ND2Reader(self.files[0]) as reader:
- self.assertEqual(reader.sizes['x'], 128)
- self.assertEqual(reader.sizes['y'], 128)
- self.assertEqual(reader.sizes['t'], 982)
- self.assertEqual(reader.sizes['c'], 1)
- self.assertEqual(reader.sizes['z'], 1)
-
- def test_frame_size_data_001(self):
- with ND2Reader(self.files[0]) as reader:
- frame = reader[13]
- self.assertEqual(frame.shape[0], 128)
- self.assertEqual(frame.shape[1], 128)
-
- def test_sizes_data_002(self):
- with ND2Reader(self.files[1]) as reader:
- self.assertEqual(reader.sizes['x'], 512)
- self.assertEqual(reader.sizes['y'], 256)
- self.assertEqual(reader.sizes['t'], 78)
- self.assertEqual(reader.sizes['c'], 1)
- self.assertEqual(reader.sizes['z'], 1)
-
- def test_frame_size_data_002(self):
- with ND2Reader(self.files[1]) as reader:
- frame = reader[13]
- self.assertEqual(frame.shape[1], 512)
- self.assertEqual(frame.shape[0], 256)
-
-
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