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pull/9/head
Jae Kwon 11 years ago
parent
commit
74de918de0
3 changed files with 14 additions and 587 deletions
  1. +14
    -0
      merkle/iavl_test.go
  2. +0
    -579
      merkle/ibp.go
  3. +0
    -8
      merkle/types.go

+ 14
- 0
merkle/iavl_test.go View File

@ -9,6 +9,7 @@ import (
"math/rand"
"encoding/binary"
"github.com/tendermint/tendermint/db"
"crypto/sha256"
)
@ -296,3 +297,16 @@ func TestPersistence(t *testing.T) {
}
}
func BenchmarkHash(b *testing.B) {
b.StopTimer()
s := randstr(128)
b.StartTimer()
for i := 0; i < b.N; i++ {
hasher := sha256.New()
hasher.Write([]byte(s))
hasher.Sum(nil)
}
}

+ 0
- 579
merkle/ibp.go View File

@ -1,579 +0,0 @@
package merkle
import (
"crypto/sha256"
)
// Immutable B+ Tree (wraps the Node root)
type IBPTree struct {
db Db
root *IBPNode
}
func NewIBPTree(db Db) *IBPTree {
return &IBPTree{db:db, root:nil}
}
func NewIBPTreeFromHash(db Db, hash ByteSlice) *IBPTree {
root := &IBPNode{
hash: hash,
flags: IBPNODE_FLAG_PERSISTED | IBPNODE_FLAG_PLACEHOLDER,
}
root.fill(db)
return &IBPTree{db:db, root:root}
}
func (self *IBPTree) Root() Node {
return self.root
}
func (self *IBPTree) Size() uint64 {
return self.root.Size()
}
func (self *IBPTree) Height() uint8 {
return self.root.Height()
}
func (self *IBPTree) Has(key Key) bool {
return self.root.has(self.db, key)
}
func (self *IBPTree) Put(key Key, value Value) (updated bool) {
self.root, updated = self.root.put(self.db, key, value)
return updated
}
func (self *IBPTree) Hash() (ByteSlice, uint64) {
return self.root.Hash()
}
func (self *IBPTree) Save() {
if self.root.hash == nil {
self.root.Hash()
}
self.root.Save(self.db)
}
func (self *IBPTree) Get(key Key) (value Value) {
return self.root.get(self.db, key)
}
func (self *IBPTree) Remove(key Key) (value Value, err error) {
newRoot, value, err := self.root.remove(self.db, key)
if err != nil {
return nil, err
}
self.root = newRoot
return value, nil
}
func (self *IBPTree) Iterator() NodeIterator {
/*
pop := func(stack []*IBPNode) ([]*IBPNode, *IBPNode) {
if len(stack) <= 0 {
return stack, nil
} else {
return stack[0:len(stack)-1], stack[len(stack)-1]
}
}
stack := make([]*IBPNode, 0, 10)
var cur *IBPNode = self.root
var itr NodeIterator
itr = func()(tn Node) {
if len(stack) > 0 || cur != nil {
for cur != nil {
stack = append(stack, cur)
cur = cur.leftFilled(self.db)
}
stack, cur = pop(stack)
tn = cur
cur = cur.rightFilled(self.db)
return tn
} else {
return nil
}
}
return itr
*/
return nil
}
// Node
type IBPNode struct {
key Key
value Value
size uint64
height uint8
hash ByteSlice
left *IBPNode
right *IBPNode
// volatile
flags byte
}
const (
IBPNODE_FLAG_PERSISTED = byte(0x01)
IBPNODE_FLAG_PLACEHOLDER = byte(0x02)
IBPNODE_DESC_HAS_VALUE = byte(0x01)
IBPNODE_DESC_HAS_LEFT = byte(0x02)
IBPNODE_DESC_HAS_RIGHT = byte(0x04)
)
func (self *IBPNode) Copy() *IBPNode {
if self == nil {
return nil
}
return &IBPNode{
key: self.key,
value: self.value,
size: self.size,
height: self.height,
left: self.left,
right: self.right,
hash: nil,
flags: byte(0),
}
}
func (self *IBPNode) Equals(other Binary) bool {
if o, ok := other.(*IBPNode); ok {
return self.hash.Equals(o.hash)
} else {
return false
}
}
func (self *IBPNode) Key() Key {
return self.key
}
func (self *IBPNode) Value() Value {
return self.value
}
func (self *IBPNode) Size() uint64 {
if self == nil { return 0 }
return self.size
}
func (self *IBPNode) Height() uint8 {
if self == nil { return 0 }
return self.height
}
func (self *IBPNode) has(db Db, key Key) (has bool) {
if self == nil { return false }
if self.key.Equals(key) {
return true
} else if key.Less(self.key) {
return self.leftFilled(db).has(db, key)
} else {
return self.rightFilled(db).has(db, key)
}
}
func (self *IBPNode) get(db Db, key Key) (value Value) {
if self == nil { return nil }
if self.key.Equals(key) {
return self.value
} else if key.Less(self.key) {
return self.leftFilled(db).get(db, key)
} else {
return self.rightFilled(db).get(db, key)
}
}
func (self *IBPNode) Hash() (ByteSlice, uint64) {
if self == nil { return nil, 0 }
if self.hash != nil {
return self.hash, 0
}
size := self.ByteSize()
buf := make([]byte, size, size)
hasher := sha256.New()
_, hashCount := self.saveToCountHashes(buf)
hasher.Write(buf)
self.hash = hasher.Sum(nil)
return self.hash, hashCount+1
}
func (self *IBPNode) Save(db Db) {
if self == nil {
return
} else if self.hash == nil {
panic("savee.hash can't be nil")
}
if self.flags & IBPNODE_FLAG_PERSISTED > 0 ||
self.flags & IBPNODE_FLAG_PLACEHOLDER > 0 {
return
}
// save self
buf := make([]byte, self.ByteSize(), self.ByteSize())
self.SaveTo(buf)
db.Put([]byte(self.hash), buf)
// save left
self.left.Save(db)
// save right
self.right.Save(db)
self.flags |= IBPNODE_FLAG_PERSISTED
}
func (self *IBPNode) put(db Db, key Key, value Value) (_ *IBPNode, updated bool) {
if self == nil {
return &IBPNode{key: key, value: value, height: 1, size: 1, hash: nil}, false
}
self = self.Copy()
if self.key.Equals(key) {
self.value = value
return self, true
}
if key.Less(self.key) {
self.left, updated = self.leftFilled(db).put(db, key, value)
} else {
self.right, updated = self.rightFilled(db).put(db, key, value)
}
if updated {
return self, updated
} else {
self.calcHeightAndSize(db)
return self.balance(db), updated
}
}
func (self *IBPNode) remove(db Db, key Key) (newSelf *IBPNode, value Value, err error) {
if self == nil { return nil, nil, NotFound(key) }
if self.key.Equals(key) {
if self.left != nil && self.right != nil {
if self.leftFilled(db).Size() < self.rightFilled(db).Size() {
self, newSelf = self.popNode(db, self.rightFilled(db).lmd(db))
} else {
self, newSelf = self.popNode(db, self.leftFilled(db).rmd(db))
}
newSelf.left = self.left
newSelf.right = self.right
newSelf.calcHeightAndSize(db)
return newSelf, self.value, nil
} else if self.left == nil {
return self.rightFilled(db), self.value, nil
} else if self.right == nil {
return self.leftFilled(db), self.value, nil
} else {
return nil, self.value, nil
}
}
if key.Less(self.key) {
if self.left == nil {
return self, nil, NotFound(key)
}
var newLeft *IBPNode
newLeft, value, err = self.leftFilled(db).remove(db, key)
if newLeft == self.leftFilled(db) { // not found
return self, nil, err
} else if err != nil { // some other error
return self, value, err
}
self = self.Copy()
self.left = newLeft
} else {
if self.right == nil {
return self, nil, NotFound(key)
}
var newRight *IBPNode
newRight, value, err = self.rightFilled(db).remove(db, key)
if newRight == self.rightFilled(db) { // not found
return self, nil, err
} else if err != nil { // some other error
return self, value, err
}
self = self.Copy()
self.right = newRight
}
self.calcHeightAndSize(db)
return self.balance(db), value, err
}
func (self *IBPNode) ByteSize() int {
// 1 byte node descriptor
// 1 byte node neight
// 8 bytes node size
size := 10
// key
size += 1 // type info
size += self.key.ByteSize()
// value
if self.value != nil {
size += 1 // type info
size += self.value.ByteSize()
} else {
size += 1
}
// children
if self.left != nil {
size += HASH_BYTE_SIZE
}
if self.right != nil {
size += HASH_BYTE_SIZE
}
return size
}
func (self *IBPNode) SaveTo(buf []byte) int {
written, _ := self.saveToCountHashes(buf)
return written
}
func (self *IBPNode) saveToCountHashes(buf []byte) (int, uint64) {
cur := 0
hashCount := uint64(0)
// node descriptor
nodeDesc := byte(0)
if self.value != nil { nodeDesc |= IBPNODE_DESC_HAS_VALUE }
if self.left != nil { nodeDesc |= IBPNODE_DESC_HAS_LEFT }
if self.right != nil { nodeDesc |= IBPNODE_DESC_HAS_RIGHT }
cur += UInt8(nodeDesc).SaveTo(buf[cur:])
// node height & size
cur += UInt8(self.height).SaveTo(buf[cur:])
cur += UInt64(self.size).SaveTo(buf[cur:])
// node key
buf[cur] = GetBinaryType(self.key)
cur += 1
cur += self.key.SaveTo(buf[cur:])
// node value
if self.value != nil {
buf[cur] = GetBinaryType(self.value)
cur += 1
cur += self.value.SaveTo(buf[cur:])
}
// left child
if self.left != nil {
leftHash, leftCount := self.left.Hash()
hashCount += leftCount
cur += leftHash.SaveTo(buf[cur:])
}
// right child
if self.right != nil {
rightHash, rightCount := self.right.Hash()
hashCount += rightCount
cur += rightHash.SaveTo(buf[cur:])
}
return cur, hashCount
}
// Given a placeholder node which has only the hash set,
// load the rest of the data from db.
// Not threadsafe.
func (self *IBPNode) fill(db Db) {
if self == nil {
panic("placeholder can't be nil")
} else if self.hash == nil {
panic("placeholder.hash can't be nil")
}
buf := db.Get(self.hash)
cur := 0
// node header
nodeDesc := byte(LoadUInt8(buf))
self.height = uint8(LoadUInt8(buf[1:]))
self.size = uint64(LoadUInt64(buf[2:]))
// key
key, cur := LoadBinary(buf, 10)
self.key = key.(Key)
// value
if nodeDesc & IBPNODE_DESC_HAS_VALUE > 0 {
self.value, cur = LoadBinary(buf, cur)
}
// children
if nodeDesc & IBPNODE_DESC_HAS_LEFT > 0 {
var leftHash ByteSlice
leftHash, cur = LoadByteSlice(buf, cur)
self.left = &IBPNode{
hash: leftHash,
flags: IBPNODE_FLAG_PERSISTED | IBPNODE_FLAG_PLACEHOLDER,
}
}
if nodeDesc & IBPNODE_DESC_HAS_RIGHT > 0 {
var rightHash ByteSlice
rightHash, cur = LoadByteSlice(buf, cur)
self.right = &IBPNode{
hash: rightHash,
flags: IBPNODE_FLAG_PERSISTED | IBPNODE_FLAG_PLACEHOLDER,
}
}
if cur != len(buf) {
panic("buf not all consumed")
}
self.flags &= ^IBPNODE_FLAG_PLACEHOLDER
}
func (self *IBPNode) leftFilled(db Db) *IBPNode {
if self.left == nil {
return nil
}
if self.left.flags & IBPNODE_FLAG_PLACEHOLDER > 0 {
self.left.fill(db)
}
return self.left
}
func (self *IBPNode) rightFilled(db Db) *IBPNode {
if self.right == nil {
return nil
}
if self.right.flags & IBPNODE_FLAG_PLACEHOLDER > 0 {
self.right.fill(db)
}
return self.right
}
// Returns a new tree (unless node is the root) & a copy of the popped node.
// Can only pop nodes that have one or no children.
func (self *IBPNode) popNode(db Db, node *IBPNode) (newSelf, new_node *IBPNode) {
if self == nil {
panic("self can't be nil")
} else if node == nil {
panic("node can't be nil")
} else if node.left != nil && node.right != nil {
panic("node hnot have both left and right")
}
if self == node {
var n *IBPNode
if node.left != nil {
n = node.leftFilled(db)
} else if node.right != nil {
n = node.rightFilled(db)
} else {
n = nil
}
node = node.Copy()
node.left = nil
node.right = nil
node.calcHeightAndSize(db)
return n, node
} else {
self = self.Copy()
if node.key.Less(self.key) {
self.left, node = self.leftFilled(db).popNode(db, node)
} else {
self.right, node = self.rightFilled(db).popNode(db, node)
}
self.calcHeightAndSize(db)
return self, node
}
}
func (self *IBPNode) rotateRight(db Db) *IBPNode {
self = self.Copy()
sl := self.leftFilled(db).Copy()
slr := sl.right
sl.right = self
self.left = slr
self.calcHeightAndSize(db)
sl.calcHeightAndSize(db)
return sl
}
func (self *IBPNode) rotateLeft(db Db) *IBPNode {
self = self.Copy()
sr := self.rightFilled(db).Copy()
srl := sr.left
sr.left = self
self.right = srl
self.calcHeightAndSize(db)
sr.calcHeightAndSize(db)
return sr
}
func (self *IBPNode) calcHeightAndSize(db Db) {
self.height = maxUint8(self.leftFilled(db).Height(), self.rightFilled(db).Height()) + 1
self.size = self.leftFilled(db).Size() + self.rightFilled(db).Size() + 1
}
func (self *IBPNode) calcBalance(db Db) int {
if self == nil {
return 0
}
return int(self.leftFilled(db).Height()) - int(self.rightFilled(db).Height())
}
func (self *IBPNode) balance(db Db) (newSelf *IBPNode) {
balance := self.calcBalance(db)
if (balance > 1) {
if (self.leftFilled(db).calcBalance(db) >= 0) {
// Left Left Case
return self.rotateRight(db)
} else {
// Left Right Case
self = self.Copy()
self.left = self.leftFilled(db).rotateLeft(db)
//self.calcHeightAndSize()
return self.rotateRight(db)
}
}
if (balance < -1) {
if (self.rightFilled(db).calcBalance(db) <= 0) {
// Right Right Case
return self.rotateLeft(db)
} else {
// Right Left Case
self = self.Copy()
self.right = self.rightFilled(db).rotateRight(db)
//self.calcHeightAndSize()
return self.rotateLeft(db)
}
}
// Nothing changed
return self
}
func (self *IBPNode) _md(side func(*IBPNode)*IBPNode) (*IBPNode) {
if self == nil {
return nil
} else if side(self) != nil {
return side(self)._md(side)
} else {
return self
}
}
func (self *IBPNode) lmd(db Db) (*IBPNode) {
return self._md(func(node *IBPNode)*IBPNode { return node.leftFilled(db) })
}
func (self *IBPNode) rmd(db Db) (*IBPNode) {
return self._md(func(node *IBPNode)*IBPNode { return node.rightFilled(db) })
}

+ 0
- 8
merkle/types.go View File

@ -18,7 +18,6 @@ type Value interface {
type Key interface {
Binary
Less(b Key) bool
}
@ -29,13 +28,10 @@ type Db interface {
type Node interface {
Binary
Key() Key
Value() Value
Size() uint64
Height() uint8
Hash() (ByteSlice, uint64)
Save(Db)
}
@ -44,18 +40,14 @@ type NodeIterator func() Node
type Tree interface {
Root() Node
Size() uint64
Height() uint8
Has(key Key) bool
Get(key Key) Value
Hash() (ByteSlice, uint64)
Save()
Put(Key, Value) bool
Remove(Key) (Value, error)
Iterator() NodeIterator
}


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