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crypto/merkle: optimize merkle tree hashing (#6513)

## Description 

Upstream https://github.com/lazyledger/lazyledger-core/pull/351 to optimize merkle tree hashing 

### Benchmarking:

```
benchmark                                 old ns/op     new ns/op     delta
BenchmarkHashAlternatives/recursive-8     22914         21949         -4.21%
BenchmarkHashAlternatives/iterative-8     21634         21939         +1.41%

benchmark                                 old allocs     new allocs     delta
BenchmarkHashAlternatives/recursive-8     398            200            -49.75%
BenchmarkHashAlternatives/iterative-8     399            301            -24.56%

benchmark                                 old bytes     new bytes     delta
BenchmarkHashAlternatives/recursive-8     19088         6496          -65.97%
BenchmarkHashAlternatives/iterative-8     21776         13984         -35.78%
```

cc @odeke-em @cuonglm
pull/6524/head
Marko 4 years ago
committed by GitHub
parent
commit
4e06dfef8c
No known key found for this signature in database GPG Key ID: 4AEE18F83AFDEB23
6 changed files with 34 additions and 8 deletions
  1. +1
    -0
      CHANGELOG_PENDING.md
  2. +18
    -0
      crypto/merkle/hash.go
  3. +1
    -1
      crypto/merkle/proof.go
  4. +1
    -0
      crypto/merkle/proof_key_path_test.go
  5. +1
    -1
      crypto/merkle/proof_test.go
  6. +12
    -6
      crypto/merkle/tree.go

+ 1
- 0
CHANGELOG_PENDING.md View File

@ -103,6 +103,7 @@ Friendly reminder: We have a [bug bounty program](https://hackerone.com/tendermi
- [statesync] \#6378 Retry requests for snapshots and add a minimum discovery time (5s) for new snapshots.
- [node/state] \#6370 graceful shutdown in the consensus reactor (@JayT106)
- [crypto/merkle] \#6443 Improve HashAlternatives performance (@cuonglm)
- [crypto/merkle] \#6513 Optimize HashAlternatives (@marbar3778)
### BUG FIXES


+ 18
- 0
crypto/merkle/hash.go View File

@ -1,6 +1,8 @@
package merkle
import (
"hash"
"github.com/tendermint/tendermint/crypto/tmhash"
)
@ -20,6 +22,14 @@ func leafHash(leaf []byte) []byte {
return tmhash.Sum(append(leafPrefix, leaf...))
}
// returns tmhash(0x00 || leaf)
func leafHashOpt(s hash.Hash, leaf []byte) []byte {
s.Reset()
s.Write(leafPrefix)
s.Write(leaf)
return s.Sum(nil)
}
// returns tmhash(0x01 || left || right)
func innerHash(left []byte, right []byte) []byte {
data := make([]byte, len(innerPrefix)+len(left)+len(right))
@ -28,3 +38,11 @@ func innerHash(left []byte, right []byte) []byte {
copy(data[n:], right)
return tmhash.Sum(data)
}
func innerHashOpt(s hash.Hash, left []byte, right []byte) []byte {
s.Reset()
s.Write(innerPrefix)
s.Write(left)
s.Write(right)
return s.Sum(nil)
}

+ 1
- 1
crypto/merkle/proof.go View File

@ -50,13 +50,13 @@ func ProofsFromByteSlices(items [][]byte) (rootHash []byte, proofs []*Proof) {
// Verify that the Proof proves the root hash.
// Check sp.Index/sp.Total manually if needed
func (sp *Proof) Verify(rootHash []byte, leaf []byte) error {
leafHash := leafHash(leaf)
if sp.Total < 0 {
return errors.New("proof total must be positive")
}
if sp.Index < 0 {
return errors.New("proof index cannot be negative")
}
leafHash := leafHash(leaf)
if !bytes.Equal(sp.LeafHash, leafHash) {
return fmt.Errorf("invalid leaf hash: wanted %X got %X", leafHash, sp.LeafHash)
}


+ 1
- 0
crypto/merkle/proof_key_path_test.go View File

@ -35,6 +35,7 @@ func TestKeyPath(t *testing.T) {
res, err := KeyPathToKeys(path.String())
require.Nil(t, err)
require.Equal(t, len(keys), len(res))
for i, key := range keys {
require.Equal(t, key, res[i])


+ 1
- 1
crypto/merkle/proof_test.go View File

@ -171,12 +171,12 @@ func TestProofValidateBasic(t *testing.T) {
}
}
func TestVoteProtobuf(t *testing.T) {
_, proofs := ProofsFromByteSlices([][]byte{
[]byte("apple"),
[]byte("watermelon"),
[]byte("kiwi"),
})
testCases := []struct {
testName string
v1 *Proof


+ 12
- 6
crypto/merkle/tree.go View File

@ -1,22 +1,28 @@
package merkle
import (
"crypto/sha256"
"hash"
"math/bits"
)
// HashFromByteSlices computes a Merkle tree where the leaves are the byte slice,
// in the provided order. It follows RFC-6962.
func HashFromByteSlices(items [][]byte) []byte {
return hashFromByteSlices(sha256.New(), items)
}
func hashFromByteSlices(sha hash.Hash, items [][]byte) []byte {
switch len(items) {
case 0:
return emptyHash()
case 1:
return leafHash(items[0])
return leafHashOpt(sha, items[0])
default:
k := getSplitPoint(int64(len(items)))
left := HashFromByteSlices(items[:k])
right := HashFromByteSlices(items[k:])
return innerHash(left, right)
left := hashFromByteSlices(sha, items[:k])
right := hashFromByteSlices(sha, items[k:])
return innerHashOpt(sha, left, right)
}
}
@ -61,7 +67,7 @@ func HashFromByteSlices(items [][]byte) []byte {
// implementation for so little benefit.
func HashFromByteSlicesIterative(input [][]byte) []byte {
items := make([][]byte, len(input))
sha := sha256.New()
for i, leaf := range input {
items[i] = leafHash(leaf)
}
@ -78,7 +84,7 @@ func HashFromByteSlicesIterative(input [][]byte) []byte {
wp := 0 // write position
for rp < size {
if rp+1 < size {
items[wp] = innerHash(items[rp], items[rp+1])
items[wp] = innerHashOpt(sha, items[rp], items[rp+1])
rp += 2
} else {
items[wp] = items[rp]


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