from nd2reader.model.image import Image import numpy as np import unittest class ImageTests(unittest.TestCase): """ Basically just tests that the Image API works and that Images act as Numpy arrays. There's very little going on here other than simply storing data. """ def setUp(self): array = np.array([[0, 1, 254], [45, 12, 9], [12, 12, 99]]) self.image = Image(array) self.image.add_params(1200.314, 17, 2, 'GFP', 1) def test_size(self): self.assertEqual(self.image.height, 3) self.assertEqual(self.image.width, 3) def test_timestamp(self): self.assertEqual(self.image.timestamp, 1.200314) def test_frame_number(self): self.assertEqual(self.image.frame_number, 17) def test_fov(self): self.assertEqual(self.image.field_of_view, 2) def test_channel(self): self.assertEqual(self.image.channel, 'GFP') def test_z_level(self): self.assertEqual(self.image.z_level, 1) def test_slice(self): subimage = self.image[:2, :2] expected = np.array([[0, 1], [45, 12]]) self.assertTrue(np.array_equal(subimage, expected))